Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1705 ATGGGAAAGAAGGGGAGTTGGTTTTCTGCAATCAAGAGGGTATTCACACACTACTCCAAGGGGAAGCAGGATTCGGATAATAAAGGCACAAAAGAGAAAAAGAAAGGTCTAGGAAAACTAAAGCATGGAGAGACCAATTCTTTCATCCCTCTCTTCAGAGAGCCAAGTAGCATTGAGAAAATCTTTGGGGACTTTGAAAGGGAGCAACAGCTATTGGCGATAAGGCCTCCCACTCCTCCTGAGAGACCCAAAACGCCACCTTATGCCCCTCCAAGAGCTGCTTCTCCTAGAGCTCCTTCTCCAAGGGGTCCTTCTCCAAGGCCTCCATCTCCAAGGGTTGCTTCTCCCAGGGCTTCTTCTCCAAGAGTTACCTCTCCCAAAGCTGCACCCTCCCGGATTGTTCATCACCACAAGGAGGTTGGCTACAGACCAGAACCAACTTTAAGGAACCAGCATGCCTCAGCTACTAAGATCCAGGCTGCTTACAGAGGTTATATGGCCAGGAGGAGTTTTAGAGCTCTAAAGGGGTTGGTTAGACTTCAAGGAGTTGTAAGAGGACAGAATGTGAAGAGGCAGACAGTAAATGCCATGAAACACATGCAACTGTTGGTGCGAGTTCAATCCCAGATTCAGTCTCGAAGGATCCAGATGTTGGAAAATCAGGCACGATATCAAGCTGAGTTCAAGAATGATAAGGAAGCAGCCAGTACCTTGGGCAAACTTGCTTTAGGCCATGGTTCTGAAGCAGGTCATGAAGAGTGGGATGATAGCTTATTGACAAAAGAGGAAATAGAGGCAAGGCTGCAGAGGAAGGTGGAAGCAATCATCAAAAGAGAAAGAGCAATGGCATTTGCATATTCACATCAGTTATGGAAAGCCACTCCGAAATCAACTCACCCCCCAGTGACAGATATGCGATCAGGTGGATTCCCCTGGTGGTGGAACTGGTTGGAAAAACAACTTCCTGCAGCAAATCCACAAGAAAAACAAGTCTTGAAGAGTTTTCAACTCACACCTCCAAGACCATACTCAGAACAGAAAACTAGTCCAAGACCTGGCTCCAGCACTCAAAGGCAACAGTCTCATTTTGCCTTTGATAACATGGACACACCCACCCCAAAATCCACAAAATCAACCATACTTACATCTTCAAGACCTGCAAGAACTCCTCCATATAGAACTCCGCAAGCAAACAGCTCAGGCTCAAAATATCAAAGACCAAGGAGTGTGGTAGCTAATTCACCTTTTGACGTGCCACTGAAGGATGATGACAGCCTCACAAGTTGCCCTCCATTTTCAGTGCCAAACTACATGGCTCCAACCCTTTCTGCCAAAGCCAAAGTGCGTGCTAGTAGTAATCCTAGAGAAAGGTTTGGTGGCACCCCAACAAGTACTGATTCAAAGAGGAGACTCTCATTCCCTTTGGCACAAGGAATTGGATCTTTCAAATGGAGTAAAGGGTTCTCAAGCAAGGATCAAGGAATACCAGATAAATTTCAGTCACTTGAATCTATAGGGAACGTGAGTGTGGATTCAACAGTGTCTTTGCCGGCAAGGGTGGGAAGAAAGCCTTTTACAAGATTTGTGTGA 1590 0.4616 MGKKGSWFSAIKRVFTHYSKGKQDSDNKGTKEKKKGLGKLKHGETNSFIPLFREPSSIEKIFGDFEREQQLLAIRPPTPPERPKTPPYAPPRAASPRAPSPRGPSPRPPSPRVASPRASSPRVTSPKAAPSRIVHHHKEVGYRPEPTLRNQHASATKIQAAYRGYMARRSFRALKGLVRLQGVVRGQNVKRQTVNAMKHMQLLVRVQSQIQSRRIQMLENQARYQAEFKNDKEAASTLGKLALGHGSEAGHEEWDDSLLTKEEIEARLQRKVEAIIKRERAMAFAYSHQLWKATPKSTHPPVTDMRSGGFPWWWNWLEKQLPAANPQEKQVLKSFQLTPPRPYSEQKTSPRPGSSTQRQQSHFAFDNMDTPTPKSTKSTILTSSRPARTPPYRTPQANSSGSKYQRPRSVVANSPFDVPLKDDDSLTSCPPFSVPNYMAPTLSAKAKVRASSNPRERFGGTPTSTDSKRRLSFPLAQGIGSFKWSKGFSSKDQGIPDKFQSLESIGNVSVDSTVSLPARVGRKPFTRFV* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1705 529 MobiDBLite consensus disorder prediction 17 41 - -
Apr3g1705 529 Pfam IQ calmodulin-binding motif 152 172 IPR000048 GO:0005515
Apr3g1705 529 Pfam Protein of unknown function (DUF4005) 394 478 IPR025064 -
Apr3g1705 529 MobiDBLite consensus disorder prediction 76 115 - -
Apr3g1705 529 MobiDBLite consensus disorder prediction 448 468 - -
Apr3g1705 529 MobiDBLite consensus disorder prediction 337 409 - -
Apr3g1705 529 SMART iq_5 150 172 IPR000048 GO:0005515
Apr3g1705 529 Gene3D - 134 171 - -
Apr3g1705 529 PANTHER IQ-DOMAIN 5-RELATED 1 526 - -
Apr3g1705 529 MobiDBLite consensus disorder prediction 337 410 - -
Apr3g1705 529 MobiDBLite consensus disorder prediction 60 137 - -
Apr3g1705 529 MobiDBLite consensus disorder prediction 17 48 - -
Apr3g1705 529 PANTHER IQ-DOMAIN 13 1 526 - -
Apr3g1705 529 ProSiteProfiles IQ motif profile. 151 179 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1705 Apr-Chr3 32691296 32697242 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1705 1 528 IQD Protein Family AT3G59690 52.669 2.80e-165 477
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1705 - - gmx:100807777 827.394