Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1700 ATGATAGCCAGCTCCTTCTGCAATGCTGATTCTATGTTTTCAAGGGAAGAGGGGATAGATGTTAGAAAAATGATGGGACATAAAAGGAGTCCCTGCTCTGTTGACCAAAGCAGCTATACTTCTATTGCATCTAAAAGGCAAAAGGCTGATTTATCCATCAGCACTAAGGAGAGGAAGGAAAAGATTGGTGAACGAATTGTTGCACTTCAGCAGCTTGTTTCACCATATGGAAAGACAGATACATCTTCTGTTCTAAAGGAGGCAATGGAATACATAGGGTTCCTTCATAAACAAGTTAAGCTGCTTAGTGCTCCTTACCTCGAAAGTTCACCAACAACCAAGATGCAGGGTATGGAACCATGCAGCTTGAGGAGTAGAGGGTTATGTCTTGTTCCTGTCTCATTTACAATTGGAGTTGCTGAAAGCAATGGTGCAGATATTTGGGCTCCCATCAAGACGAGTTCACCTAAATTTGAGAATGATGTCTCGCAATTTCATTGA 501 0.4172 MIASSFCNADSMFSREEGIDVRKMMGHKRSPCSVDQSSYTSIASKRQKADLSISTKERKEKIGERIVALQQLVSPYGKTDTSSVLKEAMEYIGFLHKQVKLLSAPYLESSPTTKMQGMEPCSLRSRGLCLVPVSFTIGVAESNGADIWAPIKTSSPKFENDVSQFH* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1700 166 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 48 109 IPR036638 GO:0046983
Apr3g1700 166 CDD bHLH_AtbHLH_like 52 103 IPR045239 -
Apr3g1700 166 PANTHER TRANSCRIPTION FACTOR BHLH154 24 146 - -
Apr3g1700 166 SMART finulus 52 101 IPR011598 GO:0046983
Apr3g1700 166 Gene3D - 43 114 IPR036638 GO:0046983
Apr3g1700 166 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 46 95 IPR011598 GO:0046983
Apr3g1700 166 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 24 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1700 Apr-Chr3 32639614 32645126 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1700 24 158 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G05710 54.430 1.23e-51 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1700 - - gmx:100809747 311.997