Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1698 ATGGCATCAAATAACCAATCACCCTCTCTGGAGATATTAGTTCGAGGACCAGAAGATTGCTCCCTCTGGACTGGGCCTCCCTTTGCCAATGGTCAACCTGGCGTCAAACTTGAAAAAGTTAATTGCGTGAATGCGAAATTCAGCGACGATGGATCGAAACTCATGGTGACGAAATCTAACTCTGTGATTACTATATACCAATGCGACACTGCTAAAGAGATTAGGTCTTTTCAAGTACCCAATGTTCTGGCTGCTATCTTATCTCCCTCTGCAACCTATTTGCAAACCTTTCAAAAACCTTCAGCGCCACAGGAAAAGAACGTCAAGCTTTGGAAAATCGAGACCGGTGATTCTGTTTACCAACATGCTCAAAAGAACATCACCAAAACCAATTGGCCTGCGATTCAGTTCAGCTCCGATGAAACTACTGCGTGCCGGTTGGCAACGAATGAGGTGCAGTTTTTTGACACTCGGGATTTCTCTAAAGGAGTTGTTTATCGGTTGAGAGTTCCGGGAGTTGCTGCTGTTGAGCTTTCTAGTACACCTGGGTCTCATGTGGCTGCATTTGTTCCAGAATCCAAGGGGGTTCCTGCCAGTGTACAGCTATTTGCTTGTGGAAATGTGTCTCAAAGTCAACCTATTGCTCGGCGTAGTTTTTTCCGATGTTCAACCACCCAACTTAAATGGAATCGTGGTTCAACTGGGCTTCTAGTGGTGGTGCAATCAGATGTTGACAAAACTAATCAGAGTTACTATGGAGAATCAAAGTTATGCTATCTAACTACAGATGGGATGCATGAAGGACTTGTGCCTCTTCGGAAAGATGGGCCTATTCATGATGCTCAGTGGTCTTATTCTGGCTTGGAATTTGCTGTTGTATATGGTTTTATGCCTGCTAAAGCAACTGTGTTTGACAAGAAGTGCAATCCTCTACTGGAGCTTGGAACTGGTCCTTACAACACTATTCGGTGGAACCCAAAAGGGAAATTTTTATGTTTGGCTGGCTTTGGTAACTTGCCTGGCGATATGGTATTCTGGGATTACGCAGATAAGAAACAACTTGGAACCACCAAGGCAGAATGGTCTGTGACTAGTGAATGGTCTCCTGATGGGTGCTATTTCATGACAGCTACCACTGCCCCAAGACTTCAAGTTGACAATGGGATCAAGATTTTTCACTACAATGGGTCATTGTTCTTCAAGAAGATGTTTGACAAGTTGTACCAGGCCGATTGGAAACCAGAGTCACCTAGTAAGTTTGGTGATATTGCTGAATTAATTCAGTCTCTCCATTTGGTACAACTTGAAGATAAAAAACCATCAGGGCAAGGACCAAAGTCAACCCAGGCTTCCATAAAAGCCTCTTCTGCCAACCCCCCTACACAAAAACCTGCTGCATATCGTCCACCGCATGCTAAGAGTGCAGCTGCTGTTCAGGCAGAGTTGTTTGGAGAGAGTCCTGCAGAATCAATGAGCAAGAATGCATTACGAAACAAGAAAAAGAGGGAGAAACAAAAGGAGAAAAAGGCTGCTTCTGATGCCAGTTCTTCGTGA 1554 0.4434 MASNNQSPSLEILVRGPEDCSLWTGPPFANGQPGVKLEKVNCVNAKFSDDGSKLMVTKSNSVITIYQCDTAKEIRSFQVPNVLAAILSPSATYLQTFQKPSAPQEKNVKLWKIETGDSVYQHAQKNITKTNWPAIQFSSDETTACRLATNEVQFFDTRDFSKGVVYRLRVPGVAAVELSSTPGSHVAAFVPESKGVPASVQLFACGNVSQSQPIARRSFFRCSTTQLKWNRGSTGLLVVVQSDVDKTNQSYYGESKLCYLTTDGMHEGLVPLRKDGPIHDAQWSYSGLEFAVVYGFMPAKATVFDKKCNPLLELGTGPYNTIRWNPKGKFLCLAGFGNLPGDMVFWDYADKKQLGTTKAEWSVTSEWSPDGCYFMTATTAPRLQVDNGIKIFHYNGSLFFKKMFDKLYQADWKPESPSKFGDIAELIQSLHLVQLEDKKPSGQGPKSTQASIKASSANPPTQKPAAYRPPHAKSAAAVQAELFGESPAESMSKNALRNKKKREKQKEKKAASDASSS* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1698 517 Gene3D - 24 194 IPR015943 GO:0005515
Apr3g1698 517 PIRSF Transl_init_eIF2A 4 517 IPR011387 GO:0003743|GO:0006413
Apr3g1698 517 SUPERFAMILY DPP6 N-terminal domain-like 42 395 - -
Apr3g1698 517 MobiDBLite consensus disorder prediction 437 517 - -
Apr3g1698 517 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2A 9 514 IPR011387 GO:0003743|GO:0006413
Apr3g1698 517 MobiDBLite consensus disorder prediction 441 462 - -
Apr3g1698 517 Gene3D - 198 401 IPR015943 GO:0005515
Apr3g1698 517 Coils Coil 493 513 - -
Apr3g1698 517 Pfam Eukaryotic translation initiation factor eIF2A 217 410 IPR013979 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1698 68 418 Eukaryotic Initiation Factors Gene Family AT5G27640 24.737 4.73e-25 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1698 K15026 - gmx:100810278 924.85