Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1638 ATGGCAAACAACGGTGATCAGAGTCAAACTGAAGCTGGAAGGCACCAAGAGGTTGGTCACAAGAGCCTTCTGCAGAGTGATGCTCTCTACCAGTATATTCTAGAGACCAGTGTCTACCCAAGAGAACATGAAGCAATGAAAGAGTTGAGAGAGTTGACAGCAAAGCATCCATGGAACATCATGACAACCTCTGCAGATGAAGGGCAATTCTTGAACTTGCTCCTTAAACTTATCAATGCCAAAAACACCATGGAAATTGGTGTCTACACTGGGTACTCCCTGCTTGCCACTGCCCTCGCTCTTCCTGAAGATGGAAAGATCTTGGCCATGGACATTAACAGGGAGAATTACGAACTTGGTTTGCCTGTAATAAAAAAAGCTGGTGTTGCCCACAAAATTGATTTCAGGGAAGGCCCTGCTCTCCCAGTTCTCGATGAAATGATTAAAGACGAAAAGAACCTTGGTAGCTTCGATTTTATCTTTGTGGATGCGGACAAGGACAATTACCTCAACTACCACAAGAGGTTGATTGAGCTTGTCAAGGTTGGAGGGGTGATCGGGTACGACAACACCTTGTGGAACGGGTCTGTGGTGGCACCCCCAGATGCTCCTCTTAGGAAGTATGTTAGGTATTACAGGGACTTCGTGTTGGAGCTCAACAAGTCTTTGGGTGTGGACCCCAGGATCGAAATTTGCATGCTTCCAGTAGGTGACGGAATCACTCTCTGCCGTAGGATCAAGTGA 744 0.4664 MANNGDQSQTEAGRHQEVGHKSLLQSDALYQYILETSVYPREHEAMKELRELTAKHPWNIMTTSADEGQFLNLLLKLINAKNTMEIGVYTGYSLLATALALPEDGKILAMDINRENYELGLPVIKKAGVAHKIDFREGPALPVLDEMIKDEKNLGSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKSLGVDPRIEICMLPVGDGITLCRRIK* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1638 247 PANTHER O-METHYLTRANSFERASE-RELATED 1 247 - -
Apr3g1638 247 CDD AdoMet_MTases 85 186 - -
Apr3g1638 247 PANTHER CAFFEOYL-COA O-METHYLTRANSFERASE 1 1 247 - -
Apr3g1638 247 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 26 245 IPR029063 -
Apr3g1638 247 Pfam O-methyltransferase 35 246 IPR002935 GO:0008171
Apr3g1638 247 Gene3D Vaccinia Virus protein VP39 21 247 IPR029063 -
Apr3g1638 247 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 22 246 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1638 Apr-Chr3 31868736 31871079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1638 3 246 Monolignol Biosynthesis Gene Families AT4G34050 87.295 6.65e-166 458
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1638 K00588 - gmx:100779260 454.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1638 3 31868736 31871079 Apr3g1638 3 31868736 31871079 ECH