Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1637 ATGGCGCAGGCAAAAGACCTCGAGCAGGTTCAATGTTTCGGTCGGAAGAAAACTGCGGTAGCCGTCACATACTGCAAGCGCGGTCGCGGCTTGATCAAGATCAACGGTTGCCCCATCGAGCTGGTCGAACCGGAAATTCTTCGGTTCAAGGCCTTCGAGCCCATCCTTCTCTTGGGGAAGCACCGGTTCGCCGGCGTTGACATGCGAATCCGCGTGAAGGGCGGTGGTCACACCTCACAGATTTACGCCATTCGCCAAAGCATTGCGAAGGCTCTCGTAGCGTTCTATCAGAAGTACGTTGATGAACAGAGCAAGAAGGAGATCAAGGACATCCTCGTACGGTATGATCGCACCTTGCTTGTTGCTGATCCCAGGCGCTGCGAGCCCAAGAAGTTCGGTGGTCGTGGCGCTCGCGCTAGGTTTCAGAAGTCTTACCGTTGA 441 0.5533 MAQAKDLEQVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGKHRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1637 146 Pfam Ribosomal protein S9/S16 14 146 IPR000754 GO:0003735|GO:0005840|GO:0006412
Apr3g1637 146 Gene3D - 2 146 IPR014721 -
Apr3g1637 146 PANTHER - 4 146 - -
Apr3g1637 146 SUPERFAMILY Ribosomal protein S5 domain 2-like 9 146 IPR020568 -
Apr3g1637 146 ProSitePatterns Ribosomal protein S9 signature. 74 92 IPR020574 GO:0003735|GO:0005840|GO:0006412
Apr3g1637 146 PANTHER RIBOSOMAL PROTEIN S9 4 146 IPR000754 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1637 Apr-Chr3 31859958 31861651 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1637 1 146 Cytoplasmic Ribosomal Protein Gene Family AT2G09990 87.671 5.61e-94 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1637 K02960 - cit:102618557 279.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1637 3 31859958 31861651 Apr3g1637 3 31859958 31861651 ECH