Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1627 ATGGTTTTACTTAAGCAAGCTCCACTTTCAACGTTGATGATCACCCTCTTTCTTTGCCTTCTCATAGTAGATGGCCAAATCCTTGAAACTCCATCACCATCATCCTCATTAATCCCTGACATATTAAACTTCATAGACCGAAGACTCGCCCAAGTCTTCCCAATTATTCAAAACTTCAAAAACACAATAACCTCAGACCCGTTTAGAATAACAGCAACATGGGTTGGTCCAGACATATGTAACTACACAGGCTTCTATTGTGACAACCCACCAGACAACCTCACTGCCACCACCATTGCTTCCATTGATTTCAATGGATTTCACCTCAGCGCACCTACCCTTGATGGGTTCATTGAGCAATTCCCCGACTTGGCTCTTTTCCACGCTAACTCCAACAATTTCTCGGGTACAATTTCGCCAAAAATAGCGCAACTCAAGCTTCTATACGAACTTGATTTAAGTAACAACTTGCTCTCTGGGGTATTCCCAATTTCGGTTCTAAACATCCCCACCTTGTCCTTTTTGGACATTCGGTACAACCTCTTCACCGGCACCGTGCCCCCACAAATTTTCATGCAAAAATTAGATGTACTTTTTCTTAACAACAACAATTTCATTTTGACACTCCCCAGCATATTAGGCAACACCCCGGTTTTTTATCTCACGTTGGCGAACAACAAATTCACTGGCCCCATTCCTCGTAGCATTGGAAAAGCCTCGTCCACGTTGATCGAAGTATTACTATTGAACAACCTTTTAACGGGTTGTCTTCCATACGAAATTGGGTTCTTAGGAAATGTCACATTGTTCGATGCTGGTGGCAATCTCTTAACTGGGTCGATACCATTGTCGTTTGGGTGCTTAAAGAAAGTGGAGCAACTCAACCTGGCTAATAATTTTTTGTACGGGCAGGTTCCGGAAGTGGTCTGTGCATTGGGGAATTTGGCGAATTTATCGTTGTCGTATAATTATTTTACGAAAGTGGGGCCTTTGTGCAAGAAGTTGATTAAAAGTGGGGTTCTTGATGTGAGGAAAAACTGTATTTTTGGTCTTCCTGATCAGAGATCGGTGGGGGAGTGTGCAGCGTTCTTTTTGATTCCAAGATCTTGTTCGCATCATGTGTCGTTTAATTTCATGCCTTGTGAGATTCCTCCTCTTTGTGAGAGACCCCGGGAGAGAAGTAAGAGGCATTTGCTCTCATATTCTGCTCTTTCAAGAAATAGAGCTGTTTTGTAA 1236 0.4264 MVLLKQAPLSTLMITLFLCLLIVDGQILETPSPSSSLIPDILNFIDRRLAQVFPIIQNFKNTITSDPFRITATWVGPDICNYTGFYCDNPPDNLTATTIASIDFNGFHLSAPTLDGFIEQFPDLALFHANSNNFSGTISPKIAQLKLLYELDLSNNLLSGVFPISVLNIPTLSFLDIRYNLFTGTVPPQIFMQKLDVLFLNNNNFILTLPSILGNTPVFYLTLANNKFTGPIPRSIGKASSTLIEVLLLNNLLTGCLPYEIGFLGNVTLFDAGGNLLTGSIPLSFGCLKKVEQLNLANNFLYGQVPEVVCALGNLANLSLSYNYFTKVGPLCKKLIKSGVLDVRKNCIFGLPDQRSVGECAAFFLIPRSCSHHVSFNFMPCEIPPLCERPRERSKRHLLSYSALSRNRAVL* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1627 411 SUPERFAMILY L domain-like 57 350 - -
Apr3g1627 411 PANTHER SCOPOLETIN GLUCOSYLTRANSFERASE 10 408 - -
Apr3g1627 411 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 10 408 - -
Apr3g1627 411 Gene3D Ribonuclease Inhibitor 218 409 IPR032675 -
Apr3g1627 411 Gene3D Ribonuclease Inhibitor 55 216 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1627 Apr-Chr3 31731986 31733264 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1627 44 367 Leucine-rich Repeat extension Gene Families AT3G24480 45.399 2.95e-90 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1627 - - gmx:100813314 642.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1627 3 31731986 31733264 Apr3g1627 3 31731986 31733264 ECH