Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1626 ATGGGAACCAACTCCATTCGCTTTTCATTCTTACTATGCTCTGTTTTGCTTTACTTGCACTTGGTGACAGCCCAAGAGCTACCAAAATCCGAAAGCGAAGCATTGGGGCTAACAGAGGCAGAAAAAAGAGAAGCACTTGAAATTATAATTGGCGGTGGAGGTTCTCCTTCTCCCTCTCCTTCACCTTCCACCCCATGCCCCCCTCCACCTCGTCCACCCACTCGGTTAGAAAAAGCACGTCGCGTGCTTCTTAAATTCAAAACCCTCATAGACGACCCCGGTTGTTACACCCAAAGCTGGAACCAAAACACCGACACGTGTAAATTCAACGGGATACGATGCAACACCTATCCAGGCCCAACGAAGGAGCTAGCAGTTTCTGGAATCGACTTAAACACAGCTAAAATAACCGGAAAAAACGGTTGCGACTTGCCCCTGGTGTCCTCGGGCATCTTGGGCAACATATCGGAATTAACATTCTTCCACGTAAACTCCAACAAATTCTCTGGTTCCGTCCCATCCCAAATCACCAATTTCCCTTATTTCTATGAATTGGACCTCAGTAACAACCAAATAACGGGTGGGTTTCCCAAGGAAGTACTTATGTCGAAACAATTAGTGTTTCTGGACCTGAGGTTCAACAGGCTCACTGGGCCAATTCCCTCGCAACTGTTTAACAAGGATCTAGACGTGATTTTCATCAACAACAATCAGTTCACTCAATGTCTACCAGAAAATTTCGGCTCCACCCCTGCCCGCTTTCTCACTTTCGCTAACAACAAACTCACGGGTTCAATTCCGAGGAGTATTGGAAATGCTTCCAAAACCCTCACCGAAGTGCTTTTCTTGGGTAACCAGTTCGACGGGTGCTTGCCCTTTGAAATTGGGTACTTAAAAAAGGCCACGGTGTTTGATGTGAGTAAGAATCTCTTAACGGGCCCAATTCCACTCTCTTTTGGGTGCTTGGAGAAGATTCGGTACCTTAATTTGGCACACAATAAATTCTACGGCGCTGTTCCGGACATTGTGTGTCAGCTCCAAGGCCTGCGCAACAACGGGAACCTGTCGTTGTCGGATAATTATTTTGTAGAAATTGGACCATCGTGCTGGAATTTGATCAAGTCCAAGGTTTTGGATGTGAGCAAAAATTGCATCCCGGGGCTCCCAAATCAGAGGTCACACCAAGAGTGTTATGAGTTTTATTACAAGGAGAAGAAGCCTTGTCCCAATGAGAGTTCTTTGTATTACATCCCTTGCAAGGGTCACTGGCAGAGCACAAGCACTGAGGCGACCGCTTCACCGCCGGAGCCGGTAACTTACAAGACTCTCAAACCGCATCGCTTGAGATTGTGA 1353 0.4686 MGTNSIRFSFLLCSVLLYLHLVTAQELPKSESEALGLTEAEKREALEIIIGGGGSPSPSPSPSTPCPPPPRPPTRLEKARRVLLKFKTLIDDPGCYTQSWNQNTDTCKFNGIRCNTYPGPTKELAVSGIDLNTAKITGKNGCDLPLVSSGILGNISELTFFHVNSNKFSGSVPSQITNFPYFYELDLSNNQITGGFPKEVLMSKQLVFLDLRFNRLTGPIPSQLFNKDLDVIFINNNQFTQCLPENFGSTPARFLTFANNKLTGSIPRSIGNASKTLTEVLFLGNQFDGCLPFEIGYLKKATVFDVSKNLLTGPIPLSFGCLEKIRYLNLAHNKFYGAVPDIVCQLQGLRNNGNLSLSDNYFVEIGPSCWNLIKSKVLDVSKNCIPGLPNQRSHQECYEFYYKEKKPCPNESSLYYIPCKGHWQSTSTEATASPPEPVTYKTLKPHRLRL* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1626 450 Gene3D Ribonuclease Inhibitor 76 252 IPR032675 -
Apr3g1626 450 MobiDBLite consensus disorder prediction 58 73 - -
Apr3g1626 450 Gene3D Ribonuclease Inhibitor 253 403 IPR032675 -
Apr3g1626 450 Pfam Leucine rich repeat N-terminal domain 79 115 IPR013210 -
Apr3g1626 450 MobiDBLite consensus disorder prediction 50 73 - -
Apr3g1626 450 SUPERFAMILY L domain-like 78 385 - -
Apr3g1626 450 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 12 436 - -
Apr3g1626 450 PANTHER BNAC05G26270D PROTEIN 12 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1626 Apr-Chr3 31723350 31725154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1626 75 397 Trihelix Transcription Factor Family AT1G12040 42.769 1.90e-76 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1626 - - gmx:100796207 591.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1626 3 31723350 31725154 Apr3g1626 3 31723350 31725154 ECH