LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Apr3g1613	ATGGAACCACCACAGGCAGGTTCAAGAGGAGCAGAAGCACTTAAACATTTATCTCCCGGATCATCAATTTCTGTTGCATATCACCCACTTTTTGGACCTTATGATGATCTCGTCCTTCTGGAGATTGATGAGAAACTTCTCCCTGATGTTCTATGCGAAAGGGTGGTCTTAAGAGGACAGCCTGATGAAGATGCAGTTCTTTGTACCCAATCAAAAACATATGCTATCAAGTTCGTTGGAACTTCCAATTCTGTTCTGCTTATACCACCTAGGAATCAGTCAGAATTTTATGAAAATCCACAAAAGAATGATAATAATAATGATGATGATGAAGAGAAAGTTGTTGCACCTGTAATCAAAGTTGCACCTGGTAACATGGAGCTTGTAGAGGTAGCCCCCAGACTTGATAAACTTAAATTGCTTCTTTCAGAGAAACCTTACAGTTTCGAGGAGTATGACATGGGAAATTTAAAAGAGAATCAGGAATCTAGAGTAGGATTATATAACTGGAATGATCTTATAGACAATATTCAAGCTAGTGATGAGGAATTAAGGTCTGCACTGCAGGCTCTTTCAGCGCTGGAGATTAATGGATATTGGAGATTAGTGAGCGAGAGTTACATGGACATGATTCTGGGAATGCTTTTGAAAAACTCAGTGTTGAATGACTGGTCACTTGCTGCACTAAATGAAGATGAAGTTGTGAGTACACTGGAATCAGATGGATTTCCTGTGGTACTTGCAAGGCATTGCTTGCATGTATATGGCAAGAAAGTAAACGATAGAATTGGTAGTTGTGTCTGGAAGTTGGATGAGAAGTGGGTATGCATACATTTTGCAAGAGAAATCCTGAGAGGAGGTAAGAGGAAGTTAGAGAGTTTCATGGATGAATGGAAGCAGAAGACACCAGATGGAATGCAGCCCACTTTTGATTTTGTGGAAGGAGAGGTATTAACGGAGAGAGTTGGAGTTGAGACATGGGTTTATGCCTTCAGTGTTTCTTCTTTGCCTTCCAGTCCAGCTGAACGTTTCTCCATTCTTTTCAGAGAGAGGCCAAAATGGGAATGGAAAGATCTGCAACCTTATATCAGGGATCTGAATATACCAGGTCTCTCTTCAGAAGGTCTGCTACTCAAATACACTCGAAGGACACAACCATCACCTGATACAGAACCAGTTTTTAGTGCAAGATAA	1194	0.407	MEPPQAGSRGAEALKHLSPGSSISVAYHPLFGPYDDLVLLEIDEKLLPDVLCERVVLRGQPDEDAVLCTQSKTYAIKFVGTSNSVLLIPPRNQSEFYENPQKNDNNNDDDEEKVVAPVIKVAPGNMELVEVAPRLDKLKLLLSEKPYSFEEYDMGNLKENQESRVGLYNWNDLIDNIQASDEELRSALQALSALEINGYWRLVSESYMDMILGMLLKNSVLNDWSLAALNEDEVVSTLESDGFPVVLARHCLHVYGKKVNDRIGSCVWKLDEKWVCIHFAREILRGGKRKLESFMDEWKQKTPDGMQPTFDFVEGEVLTERVGVETWVYAFSVSSLPSSPAERFSILFRERPKWEWKDLQPYIRDLNIPGLSSEGLLLKYTRRTQPSPDTEPVFSAR*	398

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Apr3g1613	397	MobiDBLite	consensus disorder prediction	91	110	-	-
	Apr3g1613	397	PANTHER	SISTER CHROMATID COHESION PROTEIN DCC1-RELATED	17	397	IPR019128	GO:0007064\|GO:0031390
	Apr3g1613	397	Coils	Coil	177	197	-	-
	Apr3g1613	397	Pfam	Sister chromatid cohesion protein Dcc1	38	363	IPR019128	GO:0007064\|GO:0031390

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Apr3g1613	10	397	C3H Transcription Factor Family	AT2G44580	57.360	4.45e-162	459