Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1605 ATGCTACCGAGTTCATTTTGTGTCACATTGCCATGGTTGTGTGACACCACCAACTCGCAGCTGATTCCAACCATTTCGGTCACCCTTATCTGTGTGCTATTACTATGGTTCTTTCAGAGGATCAAGAATCCAAGCAATGAAACCACCCTTCCATCTCCATTACCTCCGGGTCCCCTAGGCTTGCCATTTGTTGGGTACTTACCCTTTCTAGGAACCCTTCCGCACCTCAAATTCGACAACCTTACACGTGTTTATGGTCCGATTTTCAAGCTCATGTTGGGAACCAAAACATATGTAGTTATTAGTTCACCCTCTCTGGGGAAAGAGGTAGTGCTTGACCAAGACACCATATTTGCCAACCGTGACCCACCCATTTCTGCATTGGTTGCCTTGTATGGTGGCACTGATATAGCTTCTTTGCCTCATGGTCCACAGTGGAGAAAGGCTCGCAAGATTTTGGTGCGTGAGATGCTTAGCAACACCAACATCAGTAACTCTTTTTGTCATAGAAGGGTAGAGGTTAAAAAGTGCATCAAAGATGTGTATGAGAAGAAAATAGGGTCTCCCGTAAATGTGGGTGAGTTGGCTTTTCTAACTGCTACAAATTCAATAATGAGTATGATTTGGGGTGAGACCTTGCAAGGAGAAAAAGGGGTTGCTATTGGGGCTGAGTTTAGAGCATTGGTGTCTGAACTTATGGTGTTAATTGGGAAGCCAAATATTTCTGATCTTTACCCTGGACTAGCCTGGTTTGATTTACAAGGAATCGAGAGAAGAACAAGAAGGGTATCCCAGTGGATTGATAGGCTTTTTGATTCTGCAATCGAAAAGCGAATGAATGTGACAGAGAGTGCAGAAAATAAGTCAACGAAGAAAGATTTCCTGCAATTTCTGTTGGAGCTTACGAAGAGCGATAGTGATTCAGCATCAATGACTATGAACGAGATCAAGGCCATCCTCATAGACATTGTGGTGGGTGGAACTGAGACCACATCAACGACATTGGAATGGGTGGTGGCGAGGCTGTTGCAGCATCCAGAGGCAATGAAGAAAGTTCATGAAGAGTTGGATGCGGTAATAGGATTGGACAACTGTGTTGAATTAGAATCCCAGTTATCCAAATTGCAGTACTTAGAAGCTGTAATAAAGGAAACACTTCGTTTGCATCCCCCTCTTCCCTTTTTGATACCACGCTGTCCAAGTCAAAATAGCACTGTTGGTGGATATACCATACCAAAAGGTGCACAAGTACTGTTGAATGTGTGGACCATACATAGGGACCCTGATATTTGGGAAGATGCATTAGAATTTCGACCTGAAAGGTTTCTGAATGAGGGTGGGAACTTGGATTACTCGGGCAACAAATTTGAGTATTTTCCTTTTGGATCAGGAAGAAGAATTTGTGCAGGGCTACCTCTTGCTGAGAAGATGGTAATGTTTATGCTGGCTTCCTTATTACATTCCTTTGAGTGGAGATTGCCTAGTGGCACGGTGCTTGAATTTTCAGGCAAATTTGGCATTGTCATCAAGAAAATGAAGCCACTAGTCGTTATTCCAAAGCTTAGACTATCTAAACCAGAACTCTACCAATGA 1593 0.4325 MLPSSFCVTLPWLCDTTNSQLIPTISVTLICVLLLWFFQRIKNPSNETTLPSPLPPGPLGLPFVGYLPFLGTLPHLKFDNLTRVYGPIFKLMLGTKTYVVISSPSLGKEVVLDQDTIFANRDPPISALVALYGGTDIASLPHGPQWRKARKILVREMLSNTNISNSFCHRRVEVKKCIKDVYEKKIGSPVNVGELAFLTATNSIMSMIWGETLQGEKGVAIGAEFRALVSELMVLIGKPNISDLYPGLAWFDLQGIERRTRRVSQWIDRLFDSAIEKRMNVTESAENKSTKKDFLQFLLELTKSDSDSASMTMNEIKAILIDIVVGGTETTSTTLEWVVARLLQHPEAMKKVHEELDAVIGLDNCVELESQLSKLQYLEAVIKETLRLHPPLPFLIPRCPSQNSTVGGYTIPKGAQVLLNVWTIHRDPDIWEDALEFRPERFLNEGGNLDYSGNKFEYFPFGSGRRICAGLPLAEKMVMFMLASLLHSFEWRLPSGTVLEFSGKFGIVIKKMKPLVVIPKLRLSKPELYQ* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1605 530 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1605 530 PRINTS P450 superfamily signature 380 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1605 530 PRINTS P450 superfamily signature 459 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1605 530 PRINTS P450 superfamily signature 468 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1605 530 SUPERFAMILY Cytochrome P450 55 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1605 530 PANTHER OS08G0547900 PROTEIN 13 530 - -
Apr3g1605 530 Gene3D Cytochrome P450 41 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1605 530 PANTHER P450, PUTATIVE-RELATED 13 530 - -
Apr3g1605 530 PRINTS E-class P450 group I signature 82 101 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1605 530 PRINTS E-class P450 group I signature 106 127 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1605 530 PRINTS E-class P450 group I signature 199 217 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1605 530 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1605 530 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1605 530 PRINTS E-class P450 group I signature 379 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1605 530 PRINTS E-class P450 group I signature 420 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1605 530 PRINTS E-class P450 group I signature 458 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1605 530 PRINTS E-class P450 group I signature 468 491 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1605 530 Pfam Cytochrome P450 55 511 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1605 530 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 461 470 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1605 Apr-Chr3 31359578 31362300 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1605 20 529 Cytochrome P450 AT4G12300 46.693 1.14e-165 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1605 - - gmx:100785686 846.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1605 3 31359578 31362300 Apr9g2960 9 36460452 36463734 PCT