Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1586 ATGGGGCGCGTGAGGACGAAGACGGTGAAGAAATCCTCAAGGCAAGTGATAGAACGATACTATTCTAAGATGACCCTCGACTTCCACACGAACAAGAAGCTTCTAGAAGAAGTTGCAATCGTTCCATCAAAGAGGCTCCGCAACAAGATCGCGGGTTTCTCCACGCACCTCGTGAAGCGCATCCAAAAGGGTCCTGTTCGCGGCATCTCCCTCAAGCTTCAGGAAGAGGAGCGTGAACGCCGCATGGACTTTGTACCTGACGTTTCCGCCATTAACACCGACCACATCGAAGTCGACAAGGAAACCCTCGAAATGCTCAATTCCCTCGGATTCAATGATATGCCTGGCATCACGCAGGTTGACCCTGTCCCTGTTCAACAATCATTCCCCTTTTCCAGGAGGTATTGA 408 0.5098 MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKLLEEVAIVPSKRLRNKIAGFSTHLVKRIQKGPVRGISLKLQEEERERRMDFVPDVSAINTDHIEVDKETLEMLNSLGFNDMPGITQVDPVPVQQSFPFSRRY* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1586 135 SUPERFAMILY Rps17e-like 1 62 IPR036401 GO:0003735|GO:0005840|GO:0006412
Apr3g1586 135 Hamap 30S ribosomal protein S17e [rps17e]. 1 63 IPR001210 GO:0003735|GO:0005840|GO:0006412
Apr3g1586 135 PANTHER 40S RIBOSOMAL PROTEIN S17 1 133 - -
Apr3g1586 135 Pfam Ribosomal S17 1 120 IPR001210 GO:0003735|GO:0005840|GO:0006412
Apr3g1586 135 PANTHER 40S RIBOSOMAL PROTEIN S17 1 133 IPR001210 GO:0003735|GO:0005840|GO:0006412
Apr3g1586 135 ProSitePatterns Ribosomal protein S17e signature. 41 56 IPR018273 GO:0003735|GO:0005840|GO:0006412
Apr3g1586 135 Gene3D - 1 62 IPR036401 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1586 Apr-Chr3 31002705 31003761 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1586 1 122 Cytoplasmic Ribosomal Protein Gene Family AT5G04800 86.885 6.88e-76 220