Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1578 ATGGAAGCGTGGTTCATCATCTTAATCTCTCTGTGCATCTGCGTCCTCGTAAGAGCCATCGTCTCTGTCCTTCACAATCCATCCACAATCACAACCCCACCAGGCCCTTCTCACATCCCAATTATCACAGCCATCACATGGCTCCGAAAATCATTCTCCGAACTCGAACCAATCCTCCGAACCCTCCACGCCAAATATGGCCCTATCGTCACTCTTCGCATTGGCTCTCGCCCCTCCATCTTCATAGCCGACCGTTTCCTCGCCCATCGCGCCCTCATCCAAAACGGTTCTCTCTTCTCCGACCGCCCCAAATCCCTCGCCACCGGCAGAATCGTCAGCAGCAATCAACATAACATCAGCTCCGCCTCATACGGCGCCACGTGGCGTACTCTCCGCCGTAACCTCACCTCCGAGATTCTCCACCAGGCGCGCGTCAAGTCCTTCTCCCAAATCCGCACCTCCGTCCTCCACTCCCTCCTCACGGGGCTAAAATCCGATTCAACATCCAACCACTCCGTTAGAGTCATCCACCACTTCCAATACGCCATGTTCTGTTTGCTCGTCTTCATGTGCTTCGGCGATAGAGTTAACGACGAGAAAATCAGAGACATAGAGCGCGTGCAGCGCCAACTGCTTCTCGGTTTTAACAGATTCAATATTCTCAACTTCTGGCCAAAAATCACTGGTGTTCTGTTCCGCAATCGTTGGGAAGAGCTTTTAAGGTTTAGGAAGGAGCAAGAAGATGTGCTTGTTCCGCTTATAAGAGCGAGGAAGCAAGCGAAGGAAGAAGGTAGAGTAAACGATGATTCTATTGTGTCGTATGTTGATACGTTGTTGGAATTGGAGTTACCTGAGGAGAAAGGGAAACGGAAGCTGACTGAGGAGGAAATTGTGACGTTGTGTTCGGAATTTTTGAACGCGGGTACGGATACGACTTCGACGGCGTTACAGTGGATAATGGCGAATTTGGTGAAGTACCCGCACGTGCAAGAGAGGGTGGTGGAGGAGATAAGGGAAGCGGTGGGTGAGAGAGCGGAGAGGGAAGTGAGAGAGGAAGAGTTGCAGAAATTGGGGTATCTGAAGGCTGTGATTTTGGAAGGGTTGAGGCGTCACCCACCGGGGCACTTTGTGTTGCCGCATGCGGTAACTGAGGACGTCGTTTTGAATGATTACTTGGTGCCTAAGAATGGGACCGTGAATTTCATGGTGGCGGAGATGGGGTGGGACCCCAAGGTGTGGGAGGATCCGATGTCGTTTAAGCCTGAGAGGTTCTTGAATGATGAAGGGTTTGATATTACAGGGACCAAGGAGATTAAGATGATGCCGTTTGGTGCTGGGAGGAGGATCTGTCCTGGGTATAACTTGGCCCTGCTTCATTTGGAATATTTTGTGGCTAATTTGCTTTGGAATTTTGAGTGGAAGGTTCCAGAAGGCATTGATGTGGATTTCTCAGAGAAACAGGAGTTCACTGTGGTGATGAAACATGCGTTGCAGGTTAAAGATCACAAAGTTGTTTGA 1518 0.5026 MEAWFIILISLCICVLVRAIVSVLHNPSTITTPPGPSHIPIITAITWLRKSFSELEPILRTLHAKYGPIVTLRIGSRPSIFIADRFLAHRALIQNGSLFSDRPKSLATGRIVSSNQHNISSASYGATWRTLRRNLTSEILHQARVKSFSQIRTSVLHSLLTGLKSDSTSNHSVRVIHHFQYAMFCLLVFMCFGDRVNDEKIRDIERVQRQLLLGFNRFNILNFWPKITGVLFRNRWEELLRFRKEQEDVLVPLIRARKQAKEEGRVNDDSIVSYVDTLLELELPEEKGKRKLTEEEIVTLCSEFLNAGTDTTSTALQWIMANLVKYPHVQERVVEEIREAVGERAEREVREEELQKLGYLKAVILEGLRRHPPGHFVLPHAVTEDVVLNDYLVPKNGTVNFMVAEMGWDPKVWEDPMSFKPERFLNDEGFDITGTKEIKMMPFGAGRRICPGYNLALLHLEYFVANLLWNFEWKVPEGIDVDFSEKQEFTVVMKHALQVKDHKVV* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1578 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Apr3g1578 505 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 4 501 - -
Apr3g1578 505 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1578 505 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1578 505 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1578 505 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1578 505 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1578 505 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1578 505 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1578 505 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1578 505 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1578 505 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1578 505 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1578 505 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1578 505 SUPERFAMILY Cytochrome P450 33 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1578 505 Pfam Cytochrome P450 33 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1578 505 Gene3D Cytochrome P450 28 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1578 505 PANTHER CYTOCHROME P450 4 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1578 Apr-Chr3 30838608 30851132 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1578 1 499 Cytochrome P450 AT1G64940 57.874 0.0 601
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1578 K24184 - gmx:100792037 777.319