Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1557 ATGGCGAGATTGAAGGTGTTGTCAGCTCTTGACACGGCAAGAACACAATATTACCACTACAAAGCCATAATCATTGCAGGGATGGGACTCTTCACTGATGCCTACGACCTCTTCTCAATCACTCTCATCACCAAAATGATTGGAAGGATATATTACAGCGACCGACATGTCGAAAGCCAATTTGAGACCGAACCGGTGGTCGCATCCACTTTGGTGACCGTCGCGCTTTTAGGAACCGCCATCGGCCAAGTCGTGTTTGGCAGACTCGGCGACCTCAAAGGACGACGCCATGTCTATGGCGTCGCCTTGTTGTTGATGGTCTTCAGCTCCTTGGCTTCTGGCTTCTCCATTTGCATAAGAAGAACCTGTGTTCTTCTCAGTCTTGGCTTCTTCAGGTTTTTGCTGGGGCTGGGTATTGGTGGAGACTACCCATTATCGGCGACAATAATGTCTGAGTTTGCGAACACGAGGACAAGAGGGTCATTTATAGCGGCGGTGTTTTCGATGCAAGGATTTGGCATACTGGCAAGCTCCACCGTTACCATAATCGTCTGCTCCATATTCCGCGCCGCGTCTAAGCACTTGTCGCCGCTTCATACGCCGTCCGATGCTGACGTTGCATGGAGGTTGATACTGATGCTTGGTTCTGTTCCCGCAGCCATGACTTACTACTGGCGTATGATTATGCCCGAAACTGCGAGGTATACAGCGTTGGTGGAACAAAACGTGATGCAAGCAGCAATAGACATGGAGAGGGTTCTTGATGTAACACTGAGCCAGATTGCTGAAGAACATCCATTGCCACCACACCCACATCCCTACCCTCTCTTTTCAAGGGAATTCCTTCGCAGGCACGGTCGTGACCTGTTTGCATGTTCCTCTACATGGTTCCTGGTGGACATTGTGTTTTATAGCCAAGTCTTGTTCCAAAGTGAAATATACAAGCGCTACCTTGATGAGAAAGAGGGAGTGGATGTGTACAGCGAGGCTTTCCATGTTGCTTGGATCCAAGCCGTTATCGCTGCATGTTCCACCATTCCAGGCTATTTCTTTTCAGTTTACTTGATTGATAAGTGGGGAAGAGTCAAAATCCAAATGATGGGTTTTTTCTTCATGGCATTGGCTTTTTTTGCCATAGGGATTCCCTATTACTCATATTGGACCACTGACAAACATGAGAAAAATAAAGGGTTCATGGTTCTTTATGGTCTTGCTTTCTTTTTTGCCAATTTTGGACCCAACACAACCACTTACATTGTCCCAGCTGAACTTTTCCCTGCAAGGTTTAGGTCCACGTGTCATGGCATTTCTGGGGCAGCTGGGAAGGTTGGGGCAATCATTGGATCTGTTGGGTTTCTTTGGGCTTCTCATAGAACAAAGGAGGATGGGTACCCTAAGGGAATTGGGATGAAAAAGTCCCTTATTATACTTGGGGTGTTGTGCATATTGGGAATGTTCATCACTTTCTTTTTCACTACGGAAACCATGAGAAGGTCTTTGGAAGAGAATGAGGTTGATTCTAACGAAGCTGAAGAGAATAATGATCTTTGA 1551 0.4668 MARLKVLSALDTARTQYYHYKAIIIAGMGLFTDAYDLFSITLITKMIGRIYYSDRHVESQFETEPVVASTLVTVALLGTAIGQVVFGRLGDLKGRRHVYGVALLLMVFSSLASGFSICIRRTCVLLSLGFFRFLLGLGIGGDYPLSATIMSEFANTRTRGSFIAAVFSMQGFGILASSTVTIIVCSIFRAASKHLSPLHTPSDADVAWRLILMLGSVPAAMTYYWRMIMPETARYTALVEQNVMQAAIDMERVLDVTLSQIAEEHPLPPHPHPYPLFSREFLRRHGRDLFACSSTWFLVDIVFYSQVLFQSEIYKRYLDEKEGVDVYSEAFHVAWIQAVIAACSTIPGYFFSVYLIDKWGRVKIQMMGFFFMALAFFAIGIPYYSYWTTDKHEKNKGFMVLYGLAFFFANFGPNTTTYIVPAELFPARFRSTCHGISGAAGKVGAIIGSVGFLWASHRTKEDGYPKGIGMKKSLIILGVLCILGMFITFFFTTETMRRSLEENEVDSNEAEENNDL* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1557 516 Pfam Sugar (and other) transporter 24 504 IPR005828 GO:0016021|GO:0022857|GO:0055085
Apr3g1557 516 Gene3D MFS general substrate transporter like domains 18 516 IPR036259 -
Apr3g1557 516 ProSitePatterns Sugar transport proteins signature 2. 134 159 IPR005829 GO:0016021|GO:0022857|GO:0055085
Apr3g1557 516 ProSiteProfiles Major facilitator superfamily (MFS) profile. 22 496 IPR020846 GO:0022857
Apr3g1557 516 CDD MFS_PhT 23 485 - -
Apr3g1557 516 Coils Coil 516 516 - -
Apr3g1557 516 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-9-RELATED 2 506 - -
Apr3g1557 516 SUPERFAMILY MFS general substrate transporter 10 504 IPR036259 -
Apr3g1557 516 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 2 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1557 Apr-Chr3 30553306 30558804 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1557 1 504 Inorganic Solute Cotransporters AT1G76430 62.428 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1557 K08176 - gmx:100797683 819.305