Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1537 ATGAAGCCTGGAGTACCAATGACCCTCATTGCTCTGCTACTGCTGTTATTCGCTCCATTTTCCTCTTCTTCAAAACCCAAAGACCCGTTCCTCGGAATCGCTCCCCAAGATGAGAAGTATTACAAGTCTTCCGATGTAATAAAATGTAAAGATGGATCAGGAAAATTCAACAAGGCCCAGCTCAATGATGATTTTTGCGATTGCTCTGATGGCACCGATGAGCCTGGTACATCGGCATGTCCGGGTGGAAAATTTTTTTGCAGGAACGCAGGACATGTTGCTGTTCACCTGTTTTCATCTAGAGTGAATGATGGAATTTGTGATTGCTGTGATGGAACTGATGAATATGATGGTCAAGTAAAGTGTTCAAATACCTGCTGGGAGGCTGGGAAAGTAGCTCGAGATAAGCTGAAAAATAAGATTGCCACTTATCAAGAGGGCGTCAAATTGCGAAAGCAAGAAATTGAACTAGCTAAATTAGCTTTGGAGAAGGATGAAGCAGAACTTTCAAAATTAGCAAGGGAAGAAAGTGTACTTAAAGGGATTGTGAAACAGCTAAAGGAACATAAAGAACAAATAGAGAAGGTTGAGGAGAAGGAACGTTTACAGAAAGAAAAAGAAGAGAAGCAGAAAAAGGAATCTGAGAAGGCTAATGAAGAAAAAAATAAAGACAATGAAGAAGAAATAGGACATATAAATGAAGCTGGACAGCATTCAGCTGTTGAAGACGATCCTATGGATGAAGCAGGGGACAAATTAGCAGATGTACTTGATAATGATGATGGAGCCAGTGACAGTTCTGAAAGTGAAGGGTCTTTGCTTAATAAAGTGGAAGAGAATGCAAAAGAAGCTGAGGGAGAACCCAATGTTAATTCTGAAACTGATTCTAAGGTTGGAAACAAAGAGTCTAATGATGAAATCATCAATACAGGGAATGACGTATCTGAAAATACTGAGGGATTATCAAGGGAAGAGTTGGGCCGGCTTGTTGCTTCTCGTTGGACAGGAGAAAATGTTGATAAGCAAAGTGCTGAAGCTGATACTACATTAGACAATGAAGATCATGAAGATCTTCCTAAGGGTACAGATAATGAGGAATATGAAGGCTATGCTTCTGAAACTGATGATGAAAGTCACAAATATGATGATGACAGCCATAAATACGATGATAAATATGATGATGAAGATGAAATTGATGAAGAATATCGAGAGGATGAGCATGAAGACCTTAGTTCCTCGTACAAATCTGATTTGGATACTGAACCAGACTTGTCAGAAAATCCTTCTTGGTTAGAGAAAATACAGAAAACTGTACGGAATATTTTTCAAGCTGTTAATTTATTCCAGGCTCCAGTGAACCAATCAGATGCTGCTCGCGTACGCAAGGAATATGATGAATCAAGTACCAAGTTGTCTAAAATACAGTCTAGAATATCAAGTCTGAAACAAAAGCTAAAACATGATTTTGGTCCAGCGAAGGAGTTTTATTCATTCTATGATCATTGCTTTGAGAGCAAGCAGAACAAGTACACTTACAAAGTCTGCCCCTATAAACAGGCTTCTCAGGAGGAGGGCTATTCCACCACCCGTTTGGGGCGCTGGGACAAATTTGAGGATTCTTACAAAGTAATGGTATTTTCTAATGGTGATAAATGCTGGAATGGTCCTGATAGGAGTTTGAAGGTCAAACTAAAATGTGGGCTGAAAAACGAGATTACTGACGTAGACGAACCAAGCCGTTGCGAATATGTGGCCTTATTATCTACCCCAGCACTTTGTCAAGAGGAAAAGCTGAAGGAGTTACAACACAAACTAGAATTATTGAATTCGCAACAACCAGAAAAACATGATGAGTTGTGA 1860 0.3957 MKPGVPMTLIALLLLLFAPFSSSSKPKDPFLGIAPQDEKYYKSSDVIKCKDGSGKFNKAQLNDDFCDCSDGTDEPGTSACPGGKFFCRNAGHVAVHLFSSRVNDGICDCCDGTDEYDGQVKCSNTCWEAGKVARDKLKNKIATYQEGVKLRKQEIELAKLALEKDEAELSKLAREESVLKGIVKQLKEHKEQIEKVEEKERLQKEKEEKQKKESEKANEEKNKDNEEEIGHINEAGQHSAVEDDPMDEAGDKLADVLDNDDGASDSSESEGSLLNKVEENAKEAEGEPNVNSETDSKVGNKESNDEIINTGNDVSENTEGLSREELGRLVASRWTGENVDKQSAEADTTLDNEDHEDLPKGTDNEEYEGYASETDDESHKYDDDSHKYDDKYDDEDEIDEEYREDEHEDLSSSYKSDLDTEPDLSENPSWLEKIQKTVRNIFQAVNLFQAPVNQSDAARVRKEYDESSTKLSKIQSRISSLKQKLKHDFGPAKEFYSFYDHCFESKQNKYTYKVCPYKQASQEEGYSTTRLGRWDKFEDSYKVMVFSNGDKCWNGPDRSLKVKLKCGLKNEITDVDEPSRCEYVALLSTPALCQEEKLKELQHKLELLNSQQPEKHDEL* 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1537 619 Gene3D - 495 593 IPR009011 -
Apr3g1537 619 MobiDBLite consensus disorder prediction 275 290 - -
Apr3g1537 619 Coils Coil 150 229 - -
Apr3g1537 619 PANTHER N-LINKED OLIGOSACCHARIDE PROCESSING 301 619 IPR039794 -
Apr3g1537 619 PANTHER N-LINKED OLIGOSACCHARIDE PROCESSING 10 244 IPR039794 -
Apr3g1537 619 MobiDBLite consensus disorder prediction 407 422 - -
Apr3g1537 619 ProSiteProfiles MRH domain profile. 500 595 IPR044865 -
Apr3g1537 619 PANTHER BNACNNG14010D PROTEIN 301 619 - -
Apr3g1537 619 PANTHER BNACNNG14010D PROTEIN 10 244 - -
Apr3g1537 619 MobiDBLite consensus disorder prediction 199 427 - -
Apr3g1537 619 Pfam Glucosidase II beta subunit-like protein 461 612 IPR036607 -
Apr3g1537 619 MobiDBLite consensus disorder prediction 291 317 - -
Apr3g1537 619 MobiDBLite consensus disorder prediction 199 259 - -
Apr3g1537 619 Coils Coil 464 484 - -
Apr3g1537 619 Pfam Glucosidase II beta subunit-like 25 164 IPR028146 -
Apr3g1537 619 Coils Coil 591 611 - -
Apr3g1537 619 MobiDBLite consensus disorder prediction 344 392 - -
Apr3g1537 619 SUPERFAMILY Mannose 6-phosphate receptor domain 500 593 IPR009011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1537 Apr-Chr3 30208429 30217005 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1537 21 619 Calmodulin-binding Proteins AT5G56360 58.386 0.0 637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1537 3 30208429 30217005 Apr3g1537 3 30208429 30217005 ECH