Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1536 ATGGAAGAAGTTTGTCTGAATAGTCAGCCACTTTTTGATGAAAGTGATGAGGTTGATATTGAGGTTGAGGGGAACTCTTCTGTAGCAGATCATGATCTTGAATCTTTTAACTCACAACCAAAATACGCTTCACCTCCAACTGTGGGTCTGGAATTTGATTCCTTTGATGAAGTTTACAACTTCTACAACATTTATGCAAAGGAACAAGGCTTTGGTATCAGAGTGAGCAATTCATGGTTCAGATCAAAGAAAAAAGAGCGCTATAGAGCAAAACTTAGCTGCAGTAGTGCTGGCTTTAAGAAAAGAAGTGAGGCCAATAATCCAAGACCAGAAACAAGAACTGGTTGTCCTGCAATGATAGTGATTAGAATGGTTGAGTCGAAGAGATGGAGAATAGTGCAAGTTGAGCTTCAACACAATCATCAAGTGAGTCCACAGAGCAAACGGTTTTACAAGTCACACAAGAAAATGATCCTTGAAGCCAGAAAATCACAACCACCACCAGAGCCTATAACGGAAGTGCACACCATCAAGTTGTATCGAACAACTGTCATGGATGTTGGTTACAATGGTAACTCAAATTATGAAGAAAGTCATGACCCCAATTTTGATAATTTTAAATATTTAGAACTTAGAGAGGGGGATTCCAACGCTATATATAATTACTTTTGTCGAATTAAGTTGACCAATCCAAATTTCTTTTACTTGTTTGATATTGATGATGATGGGCACCTAAAAAATGTTTTCTGGGCTGATTCCAGGTCAAGGGCTGCTTATAATTACTTTAATGACACAGTTACGATAGACACAACTTGTTTGGCAAACAAATTTGAGATCCCTTTGGTATCATTTATTGGCATAAACCATCATGGACATTCTGTACTATTGGGCTGTGGCTTCCTTGGACATGAATCAGTCGATTATTTTGTCTGGATATTCAAGTCATGGCTTAAGTGTATGCTTGGTCGTCCTCCACATGTTGTTATTACTGACCAGTGCAAGCCATTGCAAAATGCAGTTGCTCAGGTTTTCCCTTGTGCTCGTCATTGTTATTCTTTGCATTATATCATGCAAAGAGTTCCAGAAAAGTTGGGAGGGTTGCAAGGATATGAGGCAATCAGAAGGCAGCTGTATAATGCTGTCTATGAGTCGTTAAAGATAGTTGAGTTTGAAACTTCCTGGGCTGATATGATTAAATGTCATGGACTTGGAGATAACAAGTGGCTTCAGGTGTTGTATGAAGATAGGCATCTGTGGGTTCCTGTTTACCTAAAAGATACCTTTTTTATAGGACTCATCCCAACTAAAGAAAATGAGGGGCTGACTGCATTTTTTGATGGATTTGTGCATAAGCATACATCCTTTAAGGAATTTCTTGACAAGTATGATCTAGCTCTGCACAGGAAGCACTTGAAAGAAGCCATGGCAGATTTGGAGTCTAGAAAAGTAAACTTTGAGTTGAAAACGAGATGTAATTTTGAGGTCCAGCTTTCAAAGGTGTATACAAAAGAAATCTTTACAATGTTTCAATCTGAGGTTGAGGGCATGTACTCTTGCTTTAACACAAGACAGGTAAATGTTAATGGATCTATAATAACATACATTGTGAAAGAAAGAGTTGAAGTTGAGGGGAAAGAAAAGGAAGTTAAAAGTTTTGAAGTTTTATACGAGACTACGGGATTGGATATTCGTTGCATTTGCAGTTTGTTCAATTACAAAGGATATCTATGCAGGCATGCATTGAATGTTCTCAATTATAATGGTGTTGAGGAAATCCCATCTCGGTACATCCTGCATCGTTGGAAGAGGGATTTCAAGCAAAGGTTTAATCAATTCCATGTCTCTGGTAATATTGATTCTTACAACCCTGTGTACTGGCATACTCATCTGTTTAACAATGCTCTTCCAGTGTTAGAAGTAGGGGCACAGTCACAGGAGCATTATATGGTTGCTTTAAAAGAACTGGAGGAGGTGTTAGACAAGTTTGACCATTTTGATACTGAGGATTTGTAA 2013 0.3825 MEEVCLNSQPLFDESDEVDIEVEGNSSVADHDLESFNSQPKYASPPTVGLEFDSFDEVYNFYNIYAKEQGFGIRVSNSWFRSKKKERYRAKLSCSSAGFKKRSEANNPRPETRTGCPAMIVIRMVESKRWRIVQVELQHNHQVSPQSKRFYKSHKKMILEARKSQPPPEPITEVHTIKLYRTTVMDVGYNGNSNYEESHDPNFDNFKYLELREGDSNAIYNYFCRIKLTNPNFFYLFDIDDDGHLKNVFWADSRSRAAYNYFNDTVTIDTTCLANKFEIPLVSFIGINHHGHSVLLGCGFLGHESVDYFVWIFKSWLKCMLGRPPHVVITDQCKPLQNAVAQVFPCARHCYSLHYIMQRVPEKLGGLQGYEAIRRQLYNAVYESLKIVEFETSWADMIKCHGLGDNKWLQVLYEDRHLWVPVYLKDTFFIGLIPTKENEGLTAFFDGFVHKHTSFKEFLDKYDLALHRKHLKEAMADLESRKVNFELKTRCNFEVQLSKVYTKEIFTMFQSEVEGMYSCFNTRQVNVNGSIITYIVKERVEVEGKEKEVKSFEVLYETTGLDIRCICSLFNYKGYLCRHALNVLNYNGVEEIPSRYILHRWKRDFKQRFNQFHVSGNIDSYNPVYWHTHLFNNALPVLEVGAQSQEHYMVALKELEEVLDKFDHFDTEDL* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1536 670 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 27 665 IPR031052 GO:0006355
Apr3g1536 670 Pfam MULE transposase domain 266 358 IPR018289 -
Apr3g1536 670 Pfam FAR1 DNA-binding domain 60 144 IPR004330 -
Apr3g1536 670 Coils Coil 468 488 - -
Apr3g1536 670 SMART 26again6 563 590 IPR006564 GO:0008270
Apr3g1536 670 PANTHER PROTEIN FAR1-RELATED SEQUENCE 6-LIKE ISOFORM X1 27 665 - -
Apr3g1536 670 ProSiteProfiles Zinc finger SWIM-type profile. 552 588 IPR007527 GO:0008270
Apr3g1536 670 Pfam SWIM zinc finger 562 585 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1536 Apr-Chr3 30200067 30202079 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Apr3g1536 MULE 3.3e-22 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1536 K17604 - gmx:100811666 1211.82