Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1527 ATGTGTGGAATTGCTTTGATTGTCTCAGGCATTCGGATTGACATCTCATCTTTGGCATTCGATTCAACAAGTCCACTTCGCAAAACTGAGAAATTGTTGTTCTCTTTAGATGATCTCAAAGCAGCTCTACGGAGAAGGGGTCCCGATAGCTTGGGCGCCAAGAAGGTTCTTCTGCAATTCAACGTATCAGGTGAAAACCGAATCTCATCCTTCACGGAAGACGATGATGACGTGTCATGTTCCGGAAACAAAGACATCGACGGAGAATGCCACCATTTTGCGATTCGAACCGCGGAACTTCATTTCGTCGGTGCAACTCTGCAGCTCCGGGGAACTAAACCGCTTGTTCAGCCACTGGCGGATGATTCTGGAAATGTTCTTGTGTATAATGGTGAGGTTTTTGGAGGACTTGACCTCGCTGGTGATTGCAATGATACTGAGTTTCTCATGCAGACTTTAGGAAAGTGTTGCTCCTGTGGTTCTTGTTCAACTGATCACTGTGTTATAGGTGGGAAAAGTTCTGTTCCAGATGTTCTTTCTACAATTCAAGGACCCTGGGCTATCATCTATTGGCAGGATACTTCACGAACCCTTTGGTTTGGCCGAGATGCATTTGGAAGACGGAGCCTCCTTGTTCACTGGCCTACCGAAGATGACTCAACCTTTCTGCTTTCTTCTGTATCACCTGTTTCTCCAGTTCAGCAGGCCTCTGAGTATGAAGCTCATAATGGAATAGGATGTCTTAGTTACTGGGAAGAGCTACCATGTGGAATATATAGTGTGCATGTGGATGCTTCAGATTCATGTGGATATCTGGTTGGTGAAATCAAGCTACATGAATATAAAAACTCAATGTTAAATGAACTTATCAAGTGGGAGAGAGTTTCTGTTGAACCAAGCTCTGAAGACCTGCAGACATCTTGTCATAAGAGTTCTAGGTGGAAACATGATAGGCATCTGACTTCTTTTGAGGCAGTTTCGAGTGAAACAGGTGCTCATATTTTGCTAAATGCTTTAAAGGAATCTGTGTTACGGCGTACTTCATTGTATACTATTTATCAGGGACAAGAGAAATTTGTTCCTGTGGCAATTCTTTTCTCTGGTGGCCTGGACTCTATGATACTTGCAGCATTATTGGATAAATGCCTGGATCCCAGCTATGAAATTGATTTGCTTAATGTAAGTTTTGATGGCCAGTTAGCTCCTGATAGAAAATCTGCCAAGGCAGGGTTGATAGAGCTAAGAAGAGTTGCACCTTTCAGGAGGTGGAGACTTGTGGAGATTGATGCTGACTTATCAGACCTGGTGTTTGAAACTAGTCATGTTATGTCACTCATAAATCCTGCCAACACCTACATGGACCTTAATATTGGAATTGCTTTATGGCTTGCTTCTGGCGGTAAGGGATGGGTGTCTGATGCAAATACATCTGATAATGATGATAATCAAGCACGGATGCAGTACAAGTCCAATGCAAAGATTCTCCTGGTTGGTTCTGGTGCTGATGAACAGTGTGCTGGGTACGGGAGACATAGAACAAGTTATCGACGAGGAAGTTGGCTGGGGTTACATGAGGAAATGAGACTTGACTTTCAAAGGATTTGGAAAAGAAATTTAGGGAGAGATGATAGATCTATTGCTGATAATGGAAAGGAGGCTAGATTTCCGTTCTTGGATGAGGATGTTGTAAGGGTTTTACTCAACATTCCATTGTGGGAGGTAGCCAACCTTGATCAACCTAGTGGCATTGGTGATAAGAAGATTTTAAGAGAGGTCGCAGAATTGCTTGGTTTACATGAAGCAGCAGTTTTGCCGAAACGAGCAATCCAGTTTGGTTCTAGAATCGCAAGGGAATCAAATCGGAAGAATTTTGGAAGCAATCGAGCAGCAAATCAGGCGTCTGCTGGCAGTGTAAGGATTTTGTAG 1926 0.433 MCGIALIVSGIRIDISSLAFDSTSPLRKTEKLLFSLDDLKAALRRRGPDSLGAKKVLLQFNVSGENRISSFTEDDDDVSCSGNKDIDGECHHFAIRTAELHFVGATLQLRGTKPLVQPLADDSGNVLVYNGEVFGGLDLAGDCNDTEFLMQTLGKCCSCGSCSTDHCVIGGKSSVPDVLSTIQGPWAIIYWQDTSRTLWFGRDAFGRRSLLVHWPTEDDSTFLLSSVSPVSPVQQASEYEAHNGIGCLSYWEELPCGIYSVHVDASDSCGYLVGEIKLHEYKNSMLNELIKWERVSVEPSSEDLQTSCHKSSRWKHDRHLTSFEAVSSETGAHILLNALKESVLRRTSLYTIYQGQEKFVPVAILFSGGLDSMILAALLDKCLDPSYEIDLLNVSFDGQLAPDRKSAKAGLIELRRVAPFRRWRLVEIDADLSDLVFETSHVMSLINPANTYMDLNIGIALWLASGGKGWVSDANTSDNDDNQARMQYKSNAKILLVGSGADEQCAGYGRHRTSYRRGSWLGLHEEMRLDFQRIWKRNLGRDDRSIADNGKEARFPFLDEDVVRVLLNIPLWEVANLDQPSGIGDKKILREVAELLGLHEAAVLPKRAIQFGSRIARESNRKNFGSNRAANQASAGSVRIL* 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1527 641 CDD Asn_Synthase_B_C 338 612 IPR001962 GO:0004066|GO:0006529
Apr3g1527 641 PANTHER ASPARAGINE SYNTHETASE DOMAIN-CONTAINING PROTEIN 1 1 632 - -
Apr3g1527 641 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 24 245 IPR029055 -
Apr3g1527 641 Gene3D HUPs 322 637 IPR014729 -
Apr3g1527 641 CDD Gn_AT_II_novel 1 259 - -
Apr3g1527 641 Pfam Asparagine synthase 520 601 IPR001962 GO:0004066|GO:0006529
Apr3g1527 641 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 2 265 IPR017932 -
Apr3g1527 641 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 38 226 IPR029055 -
Apr3g1527 641 MobiDBLite consensus disorder prediction 622 641 - -
Apr3g1527 641 Pfam Glutamine amidotransferase domain 117 226 IPR017932 -
Apr3g1527 641 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 357 632 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1527 - - gmx:100801355 1042.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1527 3 30095030 30109828 Apr3g1527 3 30095030 30109828 ECH