Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1523 ATGGTACTAACATTAACATGCTTTCCTTTTCCTTCCACCACCAAACTCAAGCTTGTGGCTGAAGCCGATGCATTCCCTTCATTCCTTCCCAATGAAGTCAACAAAATCAATGACCCTTTTGCTCGAAGCCTCGCTACGCGGATTCAGAGACTTCCCGTCTCTTTCTCTGAGAATCCCATCATGAGTAGTTGTGTGAAGCCATTGATGCAGCATAATGCAAGCCCGGTTGTCCTTCTACATGGTTTTGACAGCTCATGTTTAGAATGGAGATACACATATCCATTGCTTGAGGAAGCTGGTTTTGAGACATGGGCCATTGACATTCTTGGCTGGGGTTTCTCGGATTTAGGAAAACTTCCTTCATGTGATGTGGTATCAAAGCGTGATCACTTCTATCAGTTTTGGAGGTCCTACATCAAAAAGGAAATGATATTGGTTGGTCCAAGTCTTGGTGCTGCAGTTGCCATTGACTTTGCAGTCAATTATCCAGAAGCTGTGGAAAAACTTGTTTTGATTGATGCTAGTGTATATGCAGAAGGAACAGGAAACCTAGCAACTCTACCTAGAGTAATAGCATATGCTGGGATATATTTATTGAAGAGCATTCCATTACGCTTATATGCAAACTATTTGAGCTTCACAAACATATCTTTCAGTACCAGCCTTGATTGGACTAATGTGGGCCGCTTGCATTGTTTGTTGCCTTGGTGGGATGATGCTACTGTTGATTTTATGACTAGCGGTGGTTATAATGTTGCCTCCCAGATAAAAAAGGTAAAGCAGAAAACACTCATCATTTGGGGGGAGAATGATCGCATAATCAGCAATAAACTTGCAGTGCGACTGCACTGTGAATTACCTGATGCCATTATACGCCAAATACCCGATTGTGGTCACCTTCCCCATGTTGAAAGACCAGATTCTGTTGTAAAATTCATTGTTGAATTTGTTCAGAGCAAGACCAAGACAGAAAATCGATGTGTTTCCCCAGTATGA 996 0.4207 MVLTLTCFPFPSTTKLKLVAEADAFPSFLPNEVNKINDPFARSLATRIQRLPVSFSENPIMSSCVKPLMQHNASPVVLLHGFDSSCLEWRYTYPLLEEAGFETWAIDILGWGFSDLGKLPSCDVVSKRDHFYQFWRSYIKKEMILVGPSLGAAVAIDFAVNYPEAVEKLVLIDASVYAEGTGNLATLPRVIAYAGIYLLKSIPLRLYANYLSFTNISFSTSLDWTNVGRLHCLLPWWDDATVDFMTSGGYNVASQIKKVKQKTLIIWGENDRIISNKLAVRLHCELPDAIIRQIPDCGHLPHVERPDSVVKFIVEFVQSKTKTENRCVSPV* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1523 331 PRINTS Epoxide hydrolase signature 80 98 IPR000639 GO:0003824
Apr3g1523 331 PRINTS Epoxide hydrolase signature 100 115 IPR000639 GO:0003824
Apr3g1523 331 PRINTS Epoxide hydrolase signature 159 172 IPR000639 GO:0003824
Apr3g1523 331 PRINTS Epoxide hydrolase signature 294 316 IPR000639 GO:0003824
Apr3g1523 331 Gene3D alpha/beta hydrolase 66 326 IPR029058 -
Apr3g1523 331 PANTHER ALPHA/BETA FOLD HYDROLASE 17 330 - -
Apr3g1523 331 PRINTS Alpha/beta hydrolase fold signature 100 115 IPR000073 -
Apr3g1523 331 PRINTS Alpha/beta hydrolase fold signature 145 158 IPR000073 -
Apr3g1523 331 PRINTS Alpha/beta hydrolase fold signature 159 172 IPR000073 -
Apr3g1523 331 PRINTS Alpha/beta hydrolase fold signature 263 277 IPR000073 -
Apr3g1523 331 PANTHER HYDROLASE 17 330 - -
Apr3g1523 331 SUPERFAMILY alpha/beta-Hydrolases 73 318 IPR029058 -
Apr3g1523 331 Pfam Alpha/beta hydrolase family 76 311 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1523 Apr-Chr3 30023918 30040564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1523 237 317 Acyl Lipid Metabolism Gene Families AT3G10840 28.889 3.58e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1523 - - gmx:100814882 592.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1523 3 30023918 30040564 Apr3g1523 3 30023918 30040564 ECH
Apr3g1523 3 30023918 30040564 Apr7g1411 7 21229938 21236542 PCT