Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1522 ATGGCTATTTTGGTGTATTTTGTGCTTTTCCTGGCGCTGACTGGCCATTCAAGTGCTCTTTATTGTGTATGCAAAGATGGTGTGAGTGATCAAAACCTTCAGAAAGCAATAGATTATGCTTGTGGAGCTGGAGCTGATTGTACTCCTATTCTCCAAAACGGGGCTTGTTACCAACCCAACACTGTGAAGGATCACTGTAACTACGCTGTTAATAGCTATTATCAGAGAAAGGGCAATGTTCAAGGTAGCTGTGATTTTGCAGGTGCTGCCCAAACCAGTCCAAACCCACCTGCTACAGCTACATCATCTGGATGTGTTTACCCCTCAAGTCCAGGCAATGCAGGAACAACACCCTCAACAGGTTCACCAGGAACAACACCCTCAACAGGTTCACCAGGAACAACACCATCAATAGGTACACCTCCAGGCACAGGAACAGGCAATGGCACAACAATTGGTAGTCCTAATGTGTTTGGAATAAGTCCAACTTCTACAACTGGAATAAGTCCCACTGACAATGGAGCTAATTTGGAAGGCACCAATGCTAAGTTGCTATTGCTCTTTGTTCTAACCTTTTGGTTAGCATTCAGAGTCTGA 597 0.4472 MAILVYFVLFLALTGHSSALYCVCKDGVSDQNLQKAIDYACGAGADCTPILQNGACYQPNTVKDHCNYAVNSYYQRKGNVQGSCDFAGAAQTSPNPPATATSSGCVYPSSPGNAGTTPSTGSPGTTPSTGSPGTTPSIGTPPGTGTGNGTTIGSPNVFGISPTSTTGISPTDNGANLEGTNAKLLLLFVLTFWLAFRV* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1522 198 SMART X8_cls 20 107 IPR012946 -
Apr3g1522 198 MobiDBLite consensus disorder prediction 91 172 - -
Apr3g1522 198 PANTHER BETA-1,3 GLUCANASE 1 191 IPR044788 -
Apr3g1522 198 Gene3D - 15 110 - -
Apr3g1522 198 PANTHER CARBOHYDRATE-BINDING X8 DOMAIN PROTEIN 1 191 - -
Apr3g1522 198 Pfam X8 domain 21 90 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1522 Apr-Chr3 30017963 30020278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1522 8 131 Glycoside Hydrolase AT1G66250 37.037 2.87e-19 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1522 - - gmx:100811705 219.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1522 3 30017963 30020278 Apr3g1522 3 30017963 30020278 ECH
Apr3g1522 3 30017963 30020278 Apr7g1412 7 21240130 21242551 PCT