Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1501 ATGGTAAGCGGTGGAAATGGAAAGGAAGATCAAGCACCACCCTCGACGGCGGCGCGTCCCAGAATCACTCTCCCGCCACGCGCTTCCACCGAACGTATCTTCGACGGTGGGCCCACCGTGGGGTTTAGCCCTGGTCCCATGTCTCTGCTTTCCAGCTTCTTTGGCGACAACGATGAGTGCAAGTCTTTCTCGGAGCTACTTGCCGGCGCCATGGTGGACCCCACTACACCCTCACACATGCCCAGGCTCAGCCCCGCCAGTTTCCTCGATTCACCTCCCCAGGGGCACTTTGGAATGACACAGCAGCAGGCACAATCACTGGTGTCAGCTCAGGCTGTAGAAGCCCACTCCAATATGCAAATCCTAGCTGAACATCCATTCTCTATGTCAGTAATGCATACTACCTCATTCACACAGCCTAATGATGATGGCTACAACTGGAGGAAGTATGGGCAAAAACATGTGAAAGGTAGTGAATTTCCTCGAAGTTATTATAAGTGCACACATCCAAAATGTCCTGTTAAGAAAAAGGTTGAGCGGTCTCTTGAGGGTCATGTAACTGCAATTATTTATAAAGGAGAACACAATCATCAATGTCCTCATCCCAACAAGCTCACAAAGGACACCTTAACATCAAATGAAAATTCAAATACGTTGAGAGAAGAGACGAATTCTCATTCAATGTCGAAGGTTGATATAGAATCTAGTCAAGCAACAGCTGAACGTGCGTCAGGAACAAGTGAGAGTGAGGAAGTAGGTGATCATGAAACTGAAGGAGATGAGAAAAATGATGAACCTGATCCCAAGAGAAGAAATGCAGAAGTCAGGGTCCCATATACAGCCTCTGTACATAGAACTGTCACAGAACCTAGAATCATTGTGCAAACAACAAGTGAAGTGGATCTCTTGGACGATGGATATAGATGGCGCAAATATGGGCAAAAAGTTGTCAAAGGCAACCCACACCCAAGGAGCTATTACAAATGCACAACCCAAGGTTGCAATGTTCGGAAGCATGTTGAGAGGGCCTCAATGGATCCTAAAGCTGTGATAACAACATATGAAGGAAAACATAATCATGATGTGCCACCAGCGAAGACGAATAGCCACGCTATGGCCTCACAACCAGACGCACAAAATGCCATACCCGAGAAGCATGGTTTCAACAGCAGAGGTGTTGGGGGCAATGAGCAGCACTCTGTCGCAAGTTTAAGGTTGAAGGAAGAGAAGATAAAATAG 1239 0.4705 MVSGGNGKEDQAPPSTAARPRITLPPRASTERIFDGGPTVGFSPGPMSLLSSFFGDNDECKSFSELLAGAMVDPTTPSHMPRLSPASFLDSPPQGHFGMTQQQAQSLVSAQAVEAHSNMQILAEHPFSMSVMHTTSFTQPNDDGYNWRKYGQKHVKGSEFPRSYYKCTHPKCPVKKKVERSLEGHVTAIIYKGEHNHQCPHPNKLTKDTLTSNENSNTLREETNSHSMSKVDIESSQATAERASGTSESEEVGDHETEGDEKNDEPDPKRRNAEVRVPYTASVHRTVTEPRIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPHPRSYYKCTTQGCNVRKHVERASMDPKAVITTYEGKHNHDVPPAKTNSHAMASQPDAQNAIPEKHGFNSRGVGGNEQHSVASLRLKEEKIK* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1501 412 ProSiteProfiles WRKY domain profile. 136 200 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr3g1501 412 MobiDBLite consensus disorder prediction 1 35 - -
Apr3g1501 412 MobiDBLite consensus disorder prediction 217 277 - -
Apr3g1501 412 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 15 138 IPR044810 GO:0003700
Apr3g1501 412 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 137 411 IPR044810 GO:0003700
Apr3g1501 412 ProSiteProfiles WRKY domain profile. 298 363 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr3g1501 412 SUPERFAMILY WRKY DNA-binding domain 136 200 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr3g1501 412 MobiDBLite consensus disorder prediction 357 412 - -
Apr3g1501 412 Pfam WRKY DNA -binding domain 142 198 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr3g1501 412 Pfam WRKY DNA -binding domain 304 361 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr3g1501 412 PANTHER WRKY TRANSCRIPTION FACTOR 58-RELATED 137 411 - -
Apr3g1501 412 PANTHER WRKY TRANSCRIPTION FACTOR 58-RELATED 15 138 - -
Apr3g1501 412 SUPERFAMILY WRKY DNA-binding domain 295 363 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr3g1501 412 SMART WRKY_cls 141 199 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr3g1501 412 SMART WRKY_cls 303 362 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr3g1501 412 Gene3D WRKY domain 288 364 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr3g1501 412 Gene3D WRKY domain 127 201 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr3g1501 412 MobiDBLite consensus disorder prediction 217 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1501 Apr-Chr3 29756073 29760907 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1501 17 411 WRKY Transcription Factor Family AT2G03340 48.134 1.65e-137 401
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Apr3g1501 WRKY 1.5e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1501 - - gmx:100802109 558.14