Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1493 ATGAGTTCCGGTAGCAGTGACAAAGAGAAGGAGAAGGAGAAACAGAGGGTGAGTCGCACGTCGTTGATCCTATGGCACGCGCACCAAAACGACGCCGCATCGGTGCGAAAGCTCCTGCAAGAGGATCCTTCGTTGGTTATGGCCAGAGATTACGATAACCGCACGCCGCTCCACGTGGCATCCCTCCATGGTTGGATCGACGTTGCCAATTGCTTAATTGAATTCGGCGCTGATGTAAACGCGCAAGATCGTTGGAAAAACACCCCTCTGGCGGATGCAGAAGGAGCTAAGAAGAGTAACGTGATCGAGCTTTTGCAATCCCATGGAGGCTTGTCTTATGGGCAAAATGGAAGCCATTTTGAACCAAAGCCTGTTCCGCCACCGTTGCCTAACAAGTGTGATTGGGAAGTTGACCCTTCTGAACTTGACTTCTCCAACTCGGCGCGTATTGGAAAGGGGTCTTTTGGTGAGATTTTGAAAGCCCATTGGCGTGGAACGCCAGTTGCTGTCAAACGTATTTTACCATCTCTTTCAGAAGATAGACTGGTGATTCAGGACTTCAGGCATGAAGTCAATTTGTTGGTGAAGCTTCGACACCCCAACATAGTTCAGTTTCTTGGAGCTGTCACTGACAGGAAGCCCCTTATGCTAATTACTGAGTATCTAAGAGGGGGTGATCTTCATCAGTACCTCAAAGAAAAAGGTCCACTTAGTCCCTCAACAGCTATCAACTTTTCCATGGATATTGCCAGAGGAATGGCCTATCTACATAATGAACCAAATGTTATAATTCATCGAGACCTAAAGCCAAGGAATGTTCTTTTAGTCAATTCTAGTGCTGACCATTTAAAAGTTGGAGATTTTGGATTGAGTAAGCTTATCACAGTCCAGAGTTCTCATGATGTTTACAGGATGACTGGTGAAACTGGTAGCTACCGTTATATGGCTCCTGAAGTTTTCAAACATAGGAGGTATGATAAGAAAGTTGATGTGTACTCCTTTGCAATGATTTTGTACGAGATGCTTGAAGGTGAACCACCTTTTGCAAGTTATGAACCTTATGATGGAGCAAAGCGCGCTGCTGAGGGCCACAGGCCTACTTTTCGAGCAAAGGGTTATATCCCTGAATTACAAAATTTAACAGTGCAGTGTTGGGCTGCTGACATGAATCAGAGGCCTTCCTTCATAGAGATCCTTAAATGGCTTGAAAAGATCAAGGAGAATTTACCTTCAGATCATCACTGGCACTTGTTTACTTCATAA 1263 0.4513 MSSGSSDKEKEKEKQRVSRTSLILWHAHQNDAASVRKLLQEDPSLVMARDYDNRTPLHVASLHGWIDVANCLIEFGADVNAQDRWKNTPLADAEGAKKSNVIELLQSHGGLSYGQNGSHFEPKPVPPPLPNKCDWEVDPSELDFSNSARIGKGSFGEILKAHWRGTPVAVKRILPSLSEDRLVIQDFRHEVNLLVKLRHPNIVQFLGAVTDRKPLMLITEYLRGGDLHQYLKEKGPLSPSTAINFSMDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLITVQSSHDVYRMTGETGSYRYMAPEVFKHRRYDKKVDVYSFAMILYEMLEGEPPFASYEPYDGAKRAAEGHRPTFRAKGYIPELQNLTVQCWAADMNQRPSFIEILKWLEKIKENLPSDHHWHLFTS* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1493 420 ProSiteProfiles Protein kinase domain profile. 144 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g1493 420 Gene3D Phosphorylase Kinase; domain 1 129 223 - -
Apr3g1493 420 SUPERFAMILY Ankyrin repeat 23 110 IPR036770 -
Apr3g1493 420 ProSiteProfiles Ankyrin repeat profile. 52 84 IPR002110 GO:0005515
Apr3g1493 420 ProSitePatterns Serine/Threonine protein kinases active-site signature. 263 275 IPR008271 GO:0004672|GO:0006468
Apr3g1493 420 PRINTS Tyrosine kinase catalytic domain signature 219 232 IPR001245 GO:0004672|GO:0006468
Apr3g1493 420 PRINTS Tyrosine kinase catalytic domain signature 257 275 IPR001245 GO:0004672|GO:0006468
Apr3g1493 420 PRINTS Tyrosine kinase catalytic domain signature 373 395 IPR001245 GO:0004672|GO:0006468
Apr3g1493 420 SMART ANK_2a 52 81 IPR002110 GO:0005515
Apr3g1493 420 PANTHER SERINE/THREONINE-PROTEIN KINASE STY8-LIKE 8 412 - -
Apr3g1493 420 SMART serkin_6 144 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g1493 420 CDD STKc_MAP3K-like 150 402 - -
Apr3g1493 420 Gene3D Transferase(Phosphotransferase) domain 1 224 416 - -
Apr3g1493 420 ProSiteProfiles Ankyrin repeat region circular profile. 52 84 - -
Apr3g1493 420 Pfam Ankyrin repeats (many copies) 38 90 IPR002110 GO:0005515
Apr3g1493 420 SUPERFAMILY Protein kinase-like (PK-like) 143 415 IPR011009 -
Apr3g1493 420 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 8 412 - -
Apr3g1493 420 ProSitePatterns Protein kinases ATP-binding region signature. 150 171 IPR017441 GO:0005524
Apr3g1493 420 Gene3D - 2 118 IPR036770 -
Apr3g1493 420 PIRSF ILK 1 420 - -
Apr3g1493 420 Pfam Protein tyrosine and serine/threonine kinase 147 400 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1493 Apr-Chr3 29607648 29613046 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1493 9 420 MAP Kinase Kinase Kinase AT1G14000 85.194 0.0 729
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Apr3g1493 PK_Tyr_Ser-Thr 4.1e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1493 - - gmx:100793237 782.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1493 3 29607648 29613046 Apr3g1493 3 29607648 29613046 ECH