Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1481 ATGAAGTGCTTTCATTTCTCGAATGGAGAGGGTAAAGGAGAAGAAGAAGAAGGGGGAGCATCGAGTTCGAGGGGTTCGAGGGTGTCATGGGCACGCTCCCTCAGCCTCATGGACACGCGGAGGTCTCACTTTGACTCTCAGTCAACGGATTTGTCCGACACCCTCGGATTCCATGACTTCCTCTCTCAGCGCCGTGCCAACAACCTTCGAATCTTTTCCTTCTCCGAACTCAAAACCGCTACACGTGGCTTCAGCAGAACGCTATTGATCGGTGAGGGAGGGTTTGGTTGTGTCTACAGAGGGGTTCTTAATCTCAGTCATCATTCACCACCTCAAATGGACGTTGCTATCAAACAGTTGAATCGTAATGGCCACCAGGGGCATAAGGAGTGGATTAATGAAGTGAATTTGCTGGGTGTGATCAAGCATCCGAATCTGGTGAGGTTAGTGGGTTATTGTGCTGAAGATGATGAAAGAGGGATTCAAAGGCTTTTGGTGTATGAGCTTATGCCTAATAAGAGCTTGGAAGATCATCTTTTGGCTCGGGTACCATCAACACTTCTTTCCTGGGCTACGAGGTTAAAAATTGCTCAGGATGCAGCTCGTGGTTTGGCATACCTCCATGAAGAAATGGATTTTCAGCTAATATTTCGAGATTTCAAGACATCCAACATCTTACTGGATGAGAATTTCAATGCAAAGCTTTCTGATTTTGGACTTGCTAGGCAAGGACCCTCAGAAGGGTTTGGCTATGTTTCAACATCAGTTGTTGGCACCATAGGTTATGCTGCACCAGAGTACGTTCAGACTGGTAAGCTGACTGCTAAGAGTGATGTTTGGAGCTTTGGCGTAGTTCTTTATGAACTTATCACTGGGAGGAGAGCTGTAGAGAGAAACCTACCAAGAAATGAACAAAAGCTTTTGGACTGGGTAAGACCTTATGTTTCTGATGCTAGGAAGTTCCATCTTATTGTAGACCCTCGACTTGAAGGACAGTATTGCATCAAATCGGCTCGTAAACTTTCAATCCTAGCAAACAAGTGTCTCATGAAGCAGCCAAAGTCCCGTCCAAAAATGAGCGAGGTAGTTGAGTTTCTTGGAAACATTATTGATGAGACACTTCCTCAGGATGAATACATCCCCCAAGCTGATGCAGAAATTGTAGAAGAAAAGGAAGAAAAGTTATCTGTAGAGGACACTGAACCTGAACCGGCTAAACAAGGGAACAATTACCTGAAGAAGGTTTTTGAATTCAGAGACATGGTCAGCTTAAGAAATAAGTCTATTGGAAGGTTGGATTGGAAAAGTTGGGCACCAGGGCTAGTAAGAACATGGTGA 1338 0.4484 MKCFHFSNGEGKGEEEEGGASSSRGSRVSWARSLSLMDTRRSHFDSQSTDLSDTLGFHDFLSQRRANNLRIFSFSELKTATRGFSRTLLIGEGGFGCVYRGVLNLSHHSPPQMDVAIKQLNRNGHQGHKEWINEVNLLGVIKHPNLVRLVGYCAEDDERGIQRLLVYELMPNKSLEDHLLARVPSTLLSWATRLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDENFNAKLSDFGLARQGPSEGFGYVSTSVVGTIGYAAPEYVQTGKLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLLDWVRPYVSDARKFHLIVDPRLEGQYCIKSARKLSILANKCLMKQPKSRPKMSEVVEFLGNIIDETLPQDEYIPQADAEIVEEKEEKLSVEDTEPEPAKQGNNYLKKVFEFRDMVSLRNKSIGRLDWKSWAPGLVRTW* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1481 445 Gene3D Phosphorylase Kinase; domain 1 58 169 - -
Apr3g1481 445 MobiDBLite consensus disorder prediction 7 21 - -
Apr3g1481 445 ProSiteProfiles Protein kinase domain profile. 84 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g1481 445 MobiDBLite consensus disorder prediction 1 25 - -
Apr3g1481 445 CDD STKc_IRAK 90 369 - -
Apr3g1481 445 ProSitePatterns Protein kinases ATP-binding region signature. 90 118 IPR017441 GO:0005524
Apr3g1481 445 PANTHER OS01G0588500 PROTEIN-RELATED 35 396 - -
Apr3g1481 445 Pfam Protein tyrosine and serine/threonine kinase 89 366 IPR001245 GO:0004672|GO:0006468
Apr3g1481 445 PANTHER SERINE/THREONINE-PROTEIN KINASE PCRK1 35 396 - -
Apr3g1481 445 Gene3D Transferase(Phosphotransferase) domain 1 170 390 - -
Apr3g1481 445 SUPERFAMILY Protein kinase-like (PK-like) 65 366 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1481 Apr-Chr3 29415317 29418089 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1481 67 401 Glycoside Hydrolase AT3G07070 48.105 5.27e-96 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Apr3g1481 PK_Tyr_Ser-Thr 1.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1481 - - gmx:100305425 731.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1481 3 29415317 29418089 Apr3g1481 3 29415317 29418089 ECH