Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr3g1480 | ATGGGGGTTTGCTTTAGCACCCAAATTAAAACTGAGAGCCCATTTAACACTGGGTTAAGTTCAAAGTATGTGAGTGCCAATAAAAAAGATCTCAATCCATGTAATGAAGTTTACAATGATGTCATCAGCCCAAGTAGTGAAGTCTCGGTGCCCCAGACTTCAAAGAATGAGGGTGAGATTTTGGAGTCATCCAATCTCAAAAGCTTTAGTTTGACAGAACTTACGGCTGCAACCAGAAATTTCCGTTCAGATAGTGTGTTAGGAGGTGATTTTGGATCAGTTTTTAAGGGTTGGATTGATGATCACTCACTTTCAGCTGCCAAACCTGGCACGGGCATTGTTGTTGCTGTGAAAAGACTTAATCAGGAGAGCTTCCGATGTCACAAGGAGTGGTTGGCAAGGCATGGTATGATTCACGAAGCAAGTCTCGAGGTGCCTTATCTCATCCATGCTGAAGTAAACTATCTAGGCCAGCTTTCACATCCTCATCTAGTGAAATTGATTGGATATTGCTTTGAAGATAAAAATCGCCTTCTGGTATATGAATTTATGCCTCGTGGTAGCTTGGAGAATCACTTGTTCATGAGAGGCTCATACTTCCAACCACTTTCTTGGGGCCTTCGTTTGAAAGTAGCTCTTGGTGCTGCCAAGGGGCTTGCATTTCTTCACAGAGCTGAAACAAAAATGATATATCGAGATTTTAAGACTTCAAATGTCTTGCTGGATTCAAATTATAATGCAAAGCTTTCAGATTTTGGGCTGGCAAAGGACGAACCAAGCGGTGATAATAGTCATGTCTCCACAAAGGTAATGGGAACCTACGGATATGCAGCTCCTGAATATCTAGCCACAGGTCATCTCACTGCTAAGAGTGATGTCTTCAGTTTTGGAGTTGTGCTGTTGGAAATGCTATCAGGGAGAAGGGCTATTGACAAGAATAGACCAAAGGGACAGCAAAATTTGGTGGAATGGGCCAAACCATACCTAGCCAACAAGCATAAGCTTTTACGTGTATTGGATAACCGTCTTGAAGGCCAATATGCATTAGACGAGGCCCATAAAGTAGCTACCCTGTCTCTACAATGCCTTGCAACAGAATCCAAGTTGAGACCAAACATGGACGAGGTTGTCATAAATTTGGAGCAGCTTCAGGTTCCCCATATAAACGCAAACAATCAAAATCGTTCCCTTAATGGCTCTCGGCCTCGTAGAAAAAGTGCTGATGATGTTGTTGCCCATGCTAGATTCACCACAGCTTATCTACAACCTCTTACTCGACATTGCAATACTTAA | 1293 | 0.4261 | MGVCFSTQIKTESPFNTGLSSKYVSANKKDLNPCNEVYNDVISPSSEVSVPQTSKNEGEILESSNLKSFSLTELTAATRNFRSDSVLGGDFGSVFKGWIDDHSLSAAKPGTGIVVAVKRLNQESFRCHKEWLARHGMIHEASLEVPYLIHAEVNYLGQLSHPHLVKLIGYCFEDKNRLLVYEFMPRGSLENHLFMRGSYFQPLSWGLRLKVALGAAKGLAFLHRAETKMIYRDFKTSNVLLDSNYNAKLSDFGLAKDEPSGDNSHVSTKVMGTYGYAAPEYLATGHLTAKSDVFSFGVVLLEMLSGRRAIDKNRPKGQQNLVEWAKPYLANKHKLLRVLDNRLEGQYALDEAHKVATLSLQCLATESKLRPNMDEVVINLEQLQVPHINANNQNRSLNGSRPRRKSADDVVAHARFTTAYLQPLTRHCNT* | 431 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr3g1480 | 430 | ProSiteProfiles | Protein kinase domain profile. | 80 | 388 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr3g1480 | 430 | Gene3D | Phosphorylase Kinase; domain 1 | 53 | 183 | - | - | |
Apr3g1480 | 430 | PANTHER | OS01G0588500 PROTEIN-RELATED | 40 | 400 | - | - | |
Apr3g1480 | 430 | PANTHER | SERINE/THREONINE-PROTEIN KINASE PBL11-RELATED | 40 | 400 | - | - | |
Apr3g1480 | 430 | Pfam | Protein tyrosine and serine/threonine kinase | 88 | 379 | IPR001245 | GO:0004672|GO:0006468 | |
Apr3g1480 | 430 | Gene3D | Transferase(Phosphotransferase) domain 1 | 184 | 405 | - | - | |
Apr3g1480 | 430 | SUPERFAMILY | Protein kinase-like (PK-like) | 65 | 381 | IPR011009 | - | |
Apr3g1480 | 430 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 229 | 241 | IPR008271 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr3g1480 | Apr-Chr3 | 29410362 | 29413997 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr3g1480 | 39 | 380 | Glycoside Hydrolase | AT3G07070 | 44.669 | 1.45e-93 | 286 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-2 | Apr3g1480 | PK_Tyr_Ser-Thr | 9.1e-39 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr3g1480 | - | - | gmx:100809679 | 599.742 |