Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1478 ATGGGTAACGGGATAGGGAAGTTAACGGTGTGCTTCACCGGCAACGGTGGCGGGGGTCGTCGGAAGCAGGACATATCCATTTTAATAACGGAGCCGTTAGACGAGGGACTGGGTCACTCTTTCTGCTATGTTCGACCCGACCCGACACGGATATCGTCGTCGAAGGTTCACTCTGAGGAAACGACGACGTTTAGAACAATCTCAGGCGCATCAGTGAGCGCGAACACGTCGACACCGTTGTCGACGGCGTTCGTGGACCTCTACTCGTACGGTTGCATAGACAGAGCCGCGGCGTTCGAAAGTTCAACCTCGTTCGCTTCGCTTCCTCTTCAACCGATTCCGAGAAACCTCATGAATTCCGGTCCCTTTTCCGGAAACCTTGGTGGTGGCGGCGGTAGTGGATTTCCGGTTTCGGGTCCTTTGGAAAGAGGGTTCATGTCGGGTCCGATCGAGCGCGGGTTTATGTCGGGTCCAATCGATCGCGGGTTGTTTTCGGGTCCGATGGAGAGGGATGGATCGGATCAGTTTCAGAGAAGCTTCTCGCATGGCGGTTTAGGGCTTGGATTGAGAGCGAGAACGAGGAAGGGGCGGTGGATTCGAGTTCTTCAGCGGGCAATTTCGAAGACTCTGTCTCGGGGGCAGAACTCGATCGTTGCTCCGATCAAAGGGGTGGTGGTGAAGGAGCCGGAGTGGATGGTTGCGGCGGCGGAGAAGCACAATGAGAATTTGAGTGTGAATTTGAGCAGTGAGGGTAGTTTAGAAGACGATGATTCAATGGAAAGTCAAAACCTTCAATGGGCTCAGGGGAAAGCAGGGGAGGATCGTGTCCACGTTGTGGTGTCTGAGGAACACGGTTGGGTTTTCGTGGGGATCTATGATGGTTTCAATGGTCCTGATGCACCTGATTATTTGCTCTCCAATCTCTACACCGCCGTGCACAAGGAACTGAAGGGATTGTTGTGGGATGATGGGTCTGCATCCGAGAATTCGATGCTTCTCACTGGTAGTTCAAAGATCAAGTACAAAGGTGCTGCCAAGAAATGGGAGGAGAATCAAAGGAGGTGGAAGTGTGAATGGGATAGGGAAAGGTTAGAGCTTGATAGAAGATTGAAGGAGCAGCTATGTTTGAGTCGATCTGGGTCTGGTGGTGCCACTTCTATTAATCATTCCGATGTGTTGGAAGCTCTATCTCGGGCTCTCAGGAAAACTGAGGAGTCTTATCTGGATATTGCGGATAAGATGGTCATGGAGAATCCTGAACTTGCTTTGATGGGTTCTTGTGTTCTTGTGATGTTGATGAAGGGGGAGGATGTTTACGTGATGAATGTTGGGGATAGTCGAGCCGTGTTGGCTCAAAAGGCTGAGCCTGATTATTGGCTTGGGAAAATTAGGCAGGACTTGGAAAGAATCAATGAAGAGACAATGAATGATCTTGAATCGTGGGATGTTGATACGTCCAACTTGGTTCCAAGTCTAAGTGCTATTCAGCTTACCAAAGATCATAGTACATGTGTTGACGAAGAAGTCCAGAGAATAAGAAAAGAGCACCCGGATGATCCTTGTGCTGTGGTAAATGAACGTGTGAAGGGTTCTCTCAAGGTTACCCGAGCATTTGGAGCCGGATTTCTCAAACAGCCCAAGTGGAACAATGCACTTTTGGAGATGTTTAGAATAGACTACGTAGGGAATTCTCCTTACATCAGCTGCCTACCATATCTAAAACACCACAGATTAGGCCCAAAGGACAAATTTTTGATTCTATGCTCCGATGGGCTCTATCAGTACTTGTCAAACGAAGAAGCAGTAGCTGAAGTTGAACTTTTCATCACATTGCAACCTGAGGGAGACCCAGCTCAGCACTTAGTTGAAGAAGTTTTGTTTCGTGCTGCAAAGAAAGCTGGTTTGGTCTTTCACGAGTTACTTGAAATTCCACAGGGTGATAGGCGTCGTTACCATGATGATGTTTCCATCATTGTTATTTCTTTGGAGGGAAGGATATGGAGATCATGTGTATAA 2016 0.4856 MGNGIGKLTVCFTGNGGGGRRKQDISILITEPLDEGLGHSFCYVRPDPTRISSSKVHSEETTTFRTISGASVSANTSTPLSTAFVDLYSYGCIDRAAAFESSTSFASLPLQPIPRNLMNSGPFSGNLGGGGGSGFPVSGPLERGFMSGPIERGFMSGPIDRGLFSGPMERDGSDQFQRSFSHGGLGLGLRARTRKGRWIRVLQRAISKTLSRGQNSIVAPIKGVVVKEPEWMVAAAEKHNENLSVNLSSEGSLEDDDSMESQNLQWAQGKAGEDRVHVVVSEEHGWVFVGIYDGFNGPDAPDYLLSNLYTAVHKELKGLLWDDGSASENSMLLTGSSKIKYKGAAKKWEENQRRWKCEWDRERLELDRRLKEQLCLSRSGSGGATSINHSDVLEALSRALRKTEESYLDIADKMVMENPELALMGSCVLVMLMKGEDVYVMNVGDSRAVLAQKAEPDYWLGKIRQDLERINEETMNDLESWDVDTSNLVPSLSAIQLTKDHSTCVDEEVQRIRKEHPDDPCAVVNERVKGSLKVTRAFGAGFLKQPKWNNALLEMFRIDYVGNSPYISCLPYLKHHRLGPKDKFLILCSDGLYQYLSNEEAVAEVELFITLQPEGDPAQHLVEEVLFRAAKKAGLVFHELLEIPQGDRRRYHDDVSIIVISLEGRIWRSCV* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1478 671 SUPERFAMILY PP2C-like 270 663 IPR036457 -
Apr3g1478 671 SMART PP2C_4 257 660 IPR001932 -
Apr3g1478 671 Pfam Protein phosphatase 2C 393 618 IPR001932 -
Apr3g1478 671 Gene3D - 234 667 IPR036457 -
Apr3g1478 671 PANTHER PROTEIN PHOSPHATASE 2C 21 671 IPR015655 GO:0004722|GO:0006470
Apr3g1478 671 CDD PP2Cc 270 662 IPR001932 -
Apr3g1478 671 PANTHER PROTEIN PHOSPHATASE 2C 23-RELATED 21 671 - -
Apr3g1478 671 ProSiteProfiles PPM-type phosphatase domain profile. 256 662 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1478 Apr-Chr3 29393236 29396624 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1478 1 671 PP2C-type Phosphatase Gene Family AT1G07630 72.263 0.0 951
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1478 - - pvu:PHAVU_011G064200g 1190.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1478 3 29393236 29396624 Apr3g1478 3 29393236 29396624 ECH