Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1467 ATGGCCAAGACACTCATTTCTTCTCCCTCATTCATCGGTACGCCGCTTCCCTCGCTCCCTCGCCACCACTCCCCCCACCGCACCAGGCTAGTCACCACCAAGGTTAACTTCAGCTTCCACCAAATTCCCTCAATTCAATCCATTGACCACTCCATTGACTTCGCCGGAATCGTCACCAGAGCTGAAGGCCTTCTTTACACGCTCGCCGATGCCGCGGTTGCGGCGGACCCGGCGACTTCCACCGACGTGGCGACCTCCACCGATGTTGCCGTACAGAAGAACGGAGGCTGGTTCGGCTTCATCTCTGAAGCCATGGAGTTTGTTCTCAAGGTGTTGAAGGATGGTCTTTCTGCAGTGCATGTGCCTTATGCATATGGATTTGCTATCATATTACTCACTGTTGTAGTTAAGGGCCTTACGCTTCCCTTGACAAAGCAACAGGTTGAATCAACACTGGCTATGCAAAATCTTCAACCAAAAATTAAGGCCATTCAACAAAGATACGCTGGCAATCAGGAAAGGATACAACTTGAGACATCAAGGCTATATCGGCAGGCCGGGGTTAATCCACTGGCAGGTTGTTTACCGACTTTGGCTACGATTCCAGTTTGGATTGGTCTCTATCAAGCTTTATCAAATGTGGCAAATGAGGGACTTTTAACAGAGGGTTTCTTTTGGATCCCCTCTTTGGGTGGTCCTACTACCATTGCTGCCAGGCAGAGTGGATCTGGAATTTCTTGGCTTTTTCCGTTTGTGGATGGACATCCACCTTTGGGTTGGGGTGATACCGCAGCATATCTTGTCTTACCTCTTCTTCTTGTTGTTTCTCAATATGTGTCAATGGAAATCATGAAACCTCCTGAGACAGATCCTTCTCAAAAGAATTCACTGCTTCTTTTCAAGTTTCTTCCACTCATGATTGGCTACTTCTCCTTGTCTGTCCCATCAGGACTAACAATTTACTGGTTTACAAACAATGTCCTGAGCACAGCTCAACAAGTATGGTTGCGCAAATTTGGAGGTGCAAAGCCTGTTGTGAGTGAAAATGCTAGTGGAATTATTACTGCAGGGCGTGCTAAAAGATCAGCTTCGCAGCCAGAAAGAGCTGGTGAAAGGTTTAAGCAGTTAAAAGAAGAGGAGAAGAAGAAAAAGTTAAGCAAGGCACTTCCTGTGGAAGAAGTTCAGCCGCTGGATTCTGCTTCTGATGATGTCTCGGATGTAGAAAGTGACAATAAGGGACAGGAGGTAGGAGAAGAAGCTTATGCTTCTAAAGTTGGCGAAGAGGTTCAACAAAGTTTTTCTAGGGAAAGAAGAAGCAAGCGTTCAAAGCGGAAGCGTGCTGTATAA 1347 0.4684 MAKTLISSPSFIGTPLPSLPRHHSPHRTRLVTTKVNFSFHQIPSIQSIDHSIDFAGIVTRAEGLLYTLADAAVAADPATSTDVATSTDVAVQKNGGWFGFISEAMEFVLKVLKDGLSAVHVPYAYGFAIILLTVVVKGLTLPLTKQQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLGGPTTIAARQSGSGISWLFPFVDGHPPLGWGDTAAYLVLPLLLVVSQYVSMEIMKPPETDPSQKNSLLLFKFLPLMIGYFSLSVPSGLTIYWFTNNVLSTAQQVWLRKFGGAKPVVSENASGIITAGRAKRSASQPERAGERFKQLKEEEKKKKLSKALPVEEVQPLDSASDDVSDVESDNKGQEVGEEAYASKVGEEVQQSFSRERRSKRSKRKRAV* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1467 448 MobiDBLite consensus disorder prediction 356 448 - -
Apr3g1467 448 MobiDBLite consensus disorder prediction 364 389 - -
Apr3g1467 448 Pfam 60Kd inner membrane protein 125 338 IPR001708 GO:0016021|GO:0032977
Apr3g1467 448 PANTHER INNER MEMBRANE PROTEIN ALBINO3, CHLOROPLASTIC 1 441 - -
Apr3g1467 448 PANTHER OXA1 1 441 IPR001708 GO:0016021|GO:0032977
Apr3g1467 448 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 125 337 IPR028055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1467 Apr-Chr3 29275350 29281468 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1467 19 394 Chloroplast and Mitochondria Gene Families AT2G28800 68.519 0.0 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1467 K03217 - gmx:100817173 704.131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1467 3 29275350 29281468 Apr3g1467 3 29275350 29281468 ECH