Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1454 ATGTCTTTGCAAAACAAGGGATTTTGGATGGTAAAGGGTTCTGGACACATTAGTGACAGAGAGACAGTATTTGATAATCCTTCCAAAATTGAACCAAAACGACCTCATCAATGGTTTGTTGATGCTGCCGAAGTAGAATTTTTCCCAAACAAGAAACAAGCAGTAGAAGATGCAAATCAAAAATCTAGTCCAGGATTTTCAAATGTAAATTTTTCTCCCTGGGATAACAATCCCAATCTTCATTCAGTCACAAACCAATTTATTGGCCGGTTATTTGGGTCTGAAACCAGGCCTGCCAATTTCACTGAAAAAAATACTTATGTTCTGGCTGATGATTCTAATGTGAGATCAAAGATGATCACCAATCAATATGGAGATGATGCATCTTTTGGCTTGTCTATATCTCATTCTGTTGAAGATTCCGAAGCATGTATAAATTTTGGTGGAATCAAAAAAGTCAAAGTAAATCAGGTTAAGGATTCTGATGATGTACAGGCTCCAGAGGGACATAATTTTAGTAGGCAGAGTAATGGTGATCTTCATCAGGCCTATAACAGGGATGCTGAGATGAGGCCTGCATCAATAGGGCAAACCTTTGACAAGGATGGCAATGCCACTTTAATGGGACTCACCTACAGCAGAGGGGATACACATGTCAGATCAATTAGTGAGTCCTACAATAAAGAGGACACAAATATAATTTCTTTTGGTGGGTTCCCAGATGAACAGGATATTATCTCTGTGGGTAGGCCTGCTGCAGACTATGATCAACTATATAATCAATCTTCAGCTTATGTGTCAACAAAGGGTCATGAGAAAGAGTTGGATGCGTCAAGTTCAGATGTAGTTGCTAGTACTCTTCAGGTAGCAAAAGTAAAGTCTGAAACTGTGTCCAAGAATAAACAAGAGTTTAAAACAGCAAGGAAAGAAGCTCCAAACAGCTTTCCTTCTAATGTCAGGAGCTTGATATCTACTGGTATGCTTGATGGTGTTCCTGTGAAGTATGTCTCAGTGGCACGGGAGGAACTTCGTGGAATTATAAGAGGCTCTGGCTATCTTTGTGGGTGTCAGTCTTGTAACTATTCCAAGGTTCTTAATGCTTATGAGTTTGAGAGACATGCCGGCTGCAAAACAAAACATCCAAACAACCACATTTATTTTGAGAATGGAAAGACCATTTATCAAATAGTACAGGAATTGAGGAGTACCCCCGAAAGTTTGTTGTTTGATACAATTCAAACAGTTTTTGGTGCACCAATTAATCAGAAAGCGTTTTGCAGTTGGAAAGAATCATTTCAAGCAGCAACACGTGAGCTTCAACGCATTTATGGAAAGGAAGAACTTAATCTATGA 1353 0.391 MSLQNKGFWMVKGSGHISDRETVFDNPSKIEPKRPHQWFVDAAEVEFFPNKKQAVEDANQKSSPGFSNVNFSPWDNNPNLHSVTNQFIGRLFGSETRPANFTEKNTYVLADDSNVRSKMITNQYGDDASFGLSISHSVEDSEACINFGGIKKVKVNQVKDSDDVQAPEGHNFSRQSNGDLHQAYNRDAEMRPASIGQTFDKDGNATLMGLTYSRGDTHVRSISESYNKEDTNIISFGGFPDEQDIISVGRPAADYDQLYNQSSAYVSTKGHEKELDASSSDVVASTLQVAKVKSETVSKNKQEFKTARKEAPNSFPSNVRSLISTGMLDGVPVKYVSVAREELRGIIRGSGYLCGCQSCNYSKVLNAYEFERHAGCKTKHPNNHIYFENGKTIYQIVQELRSTPESLLFDTIQTVFGAPINQKAFCSWKESFQAATRELQRIYGKEELNL* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1454 450 PANTHER AUTOIMMUNE REGULATOR 1 450 - -
Apr3g1454 450 PANTHER DNA-BINDING PROTEIN 1 450 - -
Apr3g1454 450 Pfam Tify domain binding domain 345 400 IPR032308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1454 Apr-Chr3 29193804 29198634 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1454 297 433 PHD Transcription Factor Family AT3G53680 52.174 6.00e-41 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1454 - - gmx:100802229 820.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1454 3 29193804 29198634 Apr3g1454 3 29193804 29198634 ECH