Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr3g1453 | ATGAAGAGAGGCAGAGACATAGACATGGCTAATTGTTTGATGTTACTGCCCAAAGTTGGTGAAAATTGCACCAACCCATCAAGGGATAGAGTTTTAAAGGGTGGTGCCTTTCAGTGCAAGACTTGTAACAGGCAATTCCTTTCATTTCAAGCCCTTGGGGGCCACCGAGCCAGCCACAAGAAGCTAAAACTCATGGCTTCAAACCTTTCGTGTTCGACTATGAAACCAAAGGTGCACCAATGCCCGATTTGTGGGCTTGAGTTTGAAATTGGACAAGCGTTGGGAGGGCATATGAGAAAGCATAGAGCTGCAATAAATAATGGGTTTACAAACCATGATCATGCTGTGCCCAAATCTAATGCCACCAAAAGGTTTCGTTTGTGCTTGGACTTGAACTTGACACCTTATGAAAATGATCAGAACCTCAACTTAAGGACACCTGCGTTAAATTTCTTCATTTGA | 462 | 0.4329 | MKRGRDIDMANCLMLLPKVGENCTNPSRDRVLKGGAFQCKTCNRQFLSFQALGGHRASHKKLKLMASNLSCSTMKPKVHQCPICGLEFEIGQALGGHMRKHRAAINNGFTNHDHAVPKSNATKRFRLCLDLNLTPYENDQNLNLRTPALNFFI* | 154 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr3g1453 | 153 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 37 | 64 | IPR013087 | - | |
Apr3g1453 | 153 | PANTHER | ZINC FINGER PROTEIN ZAT5 | 6 | 145 | - | - | |
Apr3g1453 | 153 | SMART | c2h2final6 | 37 | 59 | IPR013087 | - | |
Apr3g1453 | 153 | SMART | c2h2final6 | 79 | 101 | IPR013087 | - | |
Apr3g1453 | 153 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 39 | 59 | IPR013087 | - | |
Apr3g1453 | 153 | Gene3D | Classic Zinc Finger | 35 | 101 | - | - | |
Apr3g1453 | 153 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 79 | 101 | IPR013087 | - | |
Apr3g1453 | 153 | PANTHER | CYS2-HIS2 ZINC FINGER TRANSCRIPTION FACTOR | 6 | 145 | - | - | |
Apr3g1453 | 153 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 81 | 101 | IPR013087 | - | |
Apr3g1453 | 153 | SUPERFAMILY | beta-beta-alpha zinc fingers | 37 | 101 | IPR036236 | - | |
Apr3g1453 | 153 | Pfam | C2H2-type zinc finger | 78 | 103 | - | - | |
Apr3g1453 | 153 | Pfam | C2H2-type zinc finger | 36 | 61 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr3g1453 | Apr-Chr3 | 29191998 | 29192633 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr3g1453 | 1 | 139 | C2H2 Transcription Factor Family | AT2G28710 | 47.712 | 3.00e-32 | 110 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Apr3g1453 | zf-C2H2_6 | 4.3e-09 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr3g1453 | - | - | gmx:112998408 | 233.032 |