Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1441 ATGGATCTTCAATTTTGCCTGATCTCTTTTTTGCTTGCGTCACTTTTACTTTACTTCCTTTCCAGCCGCAACAGCCGCCAACTACCACCCTCTCCACGGTTGCGGCTTCCAATTATTGGGCACATGCACCTCTTGGGACCCCTCCTCCACCAGTCCTTCCACCGTCTCTCCCTCAGTTACGGACCCTTGTTCTCTCTTCACCTTGGTTCCGTTCCCTGCGTTTTCGTTTCCTCCCCTCACTTCGCAAAGCAATTCCTTCAAAACAACGAGCTTGCATTTAGCTGTCGCATTGTAAACAACGCCGTAAAATGTTTCAATTACGAGTGTTCTCTTGCTTTTGCACCCTATGGTGACTACTGGCGCTTCATGAAGAAGCTGTGCATGAACGAGTTATTGAGCTCTCGTAGCGTCAACAACTTCCAACACTTGCGTGCACAAGAGACTCGCAGACTTATAAGGTTATTGACCCAGAAAGCTAAGGCTTGTGAAGCCGTGAATGTGACGGAGGAGTTGCTTAAGTTGACAAATAGCATTATTTCTAGGATGATGTTGGGGGAGGTAGAGGAAGTATGCGATGTGGTGCGTGATGTCACCCAGATCTTCGGGGAGTTTAATATTTCGGATTTCATTTGGTTGTTTAAGAATTTTGACATCCAGGGGTTTGGGAAACGGACAGAGGAATTGTATCAGAAGTATGATACGTTGGTGGAAAGGGTTATTAGCAAACGCGAGGAGATGAGGAAAAACAAAGCGGTGGAGAATGGAGGGAGTGGGAGGGATGAGGCTGAGTTCAGAGACTTTCTTGATATTTTGCTTGATTGTGCCCAGGATCAGAGCGCCGAGGTGAAAATTAACAGGAGTCACATCAAGGCCTTAGTCATGGATTTCTTCGCTGCAGGGACGGATACCACGTCCATTTCAACAGAATGGGCATTAGTGGAACTCATCAAGAACCCTTCGTCCCTAAAACAAGCTCGAGAAGAGATCGACAACGTCGTGGGAAAGAATAGACTTGTTGAAGAATCCGATTGTGCAAATCTACCTTACCTCCAAGCCATTGTTAAGGAAGCATATCGTATACACCCACCAGTGCCTTTGGTTGTTAGAAGATGTGTGACAGAATGTAAGATTGAAAATTATGTCATTCCAAAAGACGCACTAGTCTTTGTGAATGTTTGGGCCATTGGAAGAGACCCAAATAATTGGGACAATCCATTGGAGTTTCGTCCTGAAAGATTCTTAAATCTTGGCGAAGGGGATTCCACTCCCATGGATGTAAGGGGTCAGCATTTTCAACTTTTGCCATTTGGGTCTGGCAGGAGGATGTGCCCTGGAGTAAATCTAGCCATGCAGCTAGTGCCAGCACTGCTTGGGGCTATTATCCAGTGCTTTGATTTTCAGGTGATGGATTCCAAAGGTGTGGTTCTGAAGGGTGATAATATGGTGATTGATGTGGATGAGAGGCCAGGTTTGACGGCTCCAAGGGCTCATGACTTGGAGGGTGTTCCTGTTGAAAGGTTCGGCTGCAAACCACTTGAAATGCTTGGAAGCTAA 1554 0.4627 MDLQFCLISFLLASLLLYFLSSRNSRQLPPSPRLRLPIIGHMHLLGPLLHQSFHRLSLSYGPLFSLHLGSVPCVFVSSPHFAKQFLQNNELAFSCRIVNNAVKCFNYECSLAFAPYGDYWRFMKKLCMNELLSSRSVNNFQHLRAQETRRLIRLLTQKAKACEAVNVTEELLKLTNSIISRMMLGEVEEVCDVVRDVTQIFGEFNISDFIWLFKNFDIQGFGKRTEELYQKYDTLVERVISKREEMRKNKAVENGGSGRDEAEFRDFLDILLDCAQDQSAEVKINRSHIKALVMDFFAAGTDTTSISTEWALVELIKNPSSLKQAREEIDNVVGKNRLVEESDCANLPYLQAIVKEAYRIHPPVPLVVRRCVTECKIENYVIPKDALVFVNVWAIGRDPNNWDNPLEFRPERFLNLGEGDSTPMDVRGQHFQLLPFGSGRRMCPGVNLAMQLVPALLGAIIQCFDFQVMDSKGVVLKGDNMVIDVDERPGLTAPRAHDLEGVPVERFGCKPLEMLGS* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1441 517 PRINTS E-class P450 group I signature 57 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1441 517 PRINTS E-class P450 group I signature 288 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1441 517 PRINTS E-class P450 group I signature 308 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1441 517 PRINTS E-class P450 group I signature 351 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1441 517 PRINTS E-class P450 group I signature 391 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1441 517 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1441 517 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1441 517 Pfam Cytochrome P450 29 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1441 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Apr3g1441 517 PANTHER CYTOCHROME P450 FAMILY FLAVONE SYNTHASE 9 509 - -
Apr3g1441 517 SUPERFAMILY Cytochrome P450 29 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1441 517 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 9 509 - -
Apr3g1441 517 Gene3D Cytochrome P450 20 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1441 517 Coils Coil 322 342 - -
Apr3g1441 517 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1441 517 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1441 517 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1441 517 PRINTS P450 superfamily signature 443 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1441 Apr-Chr3 29107412 29111276 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1441 1 515 Cytochrome P450 AT5G06900 41.243 4.90e-142 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1441 K23179 K24188 ag:BAA22423 717.227