Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1438 ATGGATCTTCAGCTTCTCCTTGGGACTTTCTTCCTTTCAGCGCTTCTTCTTTACTTCTTTTTCCACCGTCACAGCCACCACCTTCCACCGTCTCCACTATTATGGGTTCCAGTAATTGGGCACATGCACCTCTTGGGTCCCCTTCTCCACCACTCCCTCCACCGTCTCTCCCTCCGTTACGGACCCTTATTCTCTCTTCGCCTTGGTTCCGTTCCCTGCGTTGTCGTTTCCTCCCCACACTTTGCTAAGCAATTCCTTCAAACCAACGAGCTTGCCTTTAGTTGTCGCTTGGAAAGCACTGCCATAAAACGTCTCACTTACGAGTGTTCTCTCGCTTTTGCACCCTACGGTGATTATTGGCGCTTCATTAAGAAGCTGAGCATGAATGAACTCTTGGGCTCTCGTAGCGTCAACAACTTTCAACACCTGCGTGCACACGAGACTCGTAGGTTTCTAAAGTTGTTGAGCCAGAAAGCTAAGGCTTGTGAAGCCGTGAATGTGACGGATGAGATGCTTAAGTTGACAAATAACGTTATTTCTAGGATGATTTTGGGGGAGGCAGAGGAAGCAAGGGATGTGGTGCGTGGTGTGACCAAGATCTTCGGAGAGTTTAATGTTTCGGATTTTATTTGGTTGTTTAAGAGTTTTGACTTCCAAGGTTTTGGGGAAAGGATAGAGGATTTGTTCCGGAGGTTTGATTCGTTGGTGGAAAAGGTTATCAGCAAACGCGAGGAGATGAGGAAAAACAAAGCGATAGAGAATGGAGAGAGTTGGAGGGGTGAGGGTGAAATCAAAGACTTTCTTAATATTTTGCTTGATTATGTCGATGACGAGAGCTCTGAGGTGAAAATCAACAGGGTTCACATTAAGGCCTTGATTATGGATTTCTTTACAGCGGGGACAGATACAACGGCCACTTCAACAGAATGGGCATTAGTGGAACTCATCAAGAACCCTTCGTTACTACAACAAGCTCGAGAAGAGATCGACAAGGTGGTGGGAAAAAGTAGACTTGTTGAAGAATCCGATTTTCCAAATCTACCCTATTTGCAAGCCATTGTTAAGGAAACATATCGACTACACCCACCAGTGCCTTTGGTTACTAGAAGATGTGTGACAGAATGTAAGATTGAAAATTATGTCATTCCGAAAGATACACTTTTGGCTGTCAATGTTTGGTCCATTGGAAGAAACTCAAATTATTGGGACAACCCATTGGAGTTTTGTCCAGAACGATTCTTAAATATTGGTGAAGGTGATTCAAAAGGGCTCATAGATGTAAGGGGTCAGCATTTTCAACTTTTGCCATTTGGGTCTGGCAGGAGGATGTGCCCTGGAGTAAATCTAGCCATGCAGCTAGTGCCAGCACTGCTTGGGGCTATTATCCAGTGCTTTGATTTTCAAGTGATGGAGTCCAAAGGTGTGGTTTTGAATGATGATAACATGGTGATTGATATGGATGAGAGGCCCGGTTTGACGGCTCCAAGGGCTCACGACTTAGTGTGTGTTCCTGTTGAAAGGGAAAGGTTCAACTACAAACCACTTTAA 1548 0.449 MDLQLLLGTFFLSALLLYFFFHRHSHHLPPSPLLWVPVIGHMHLLGPLLHHSLHRLSLRYGPLFSLRLGSVPCVVVSSPHFAKQFLQTNELAFSCRLESTAIKRLTYECSLAFAPYGDYWRFIKKLSMNELLGSRSVNNFQHLRAHETRRFLKLLSQKAKACEAVNVTDEMLKLTNNVISRMILGEAEEARDVVRGVTKIFGEFNVSDFIWLFKSFDFQGFGERIEDLFRRFDSLVEKVISKREEMRKNKAIENGESWRGEGEIKDFLNILLDYVDDESSEVKINRVHIKALIMDFFTAGTDTTATSTEWALVELIKNPSLLQQAREEIDKVVGKSRLVEESDFPNLPYLQAIVKETYRLHPPVPLVTRRCVTECKIENYVIPKDTLLAVNVWSIGRNSNYWDNPLEFCPERFLNIGEGDSKGLIDVRGQHFQLLPFGSGRRMCPGVNLAMQLVPALLGAIIQCFDFQVMESKGVVLNDDNMVIDMDERPGLTAPRAHDLVCVPVERERFNYKPL* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1438 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Apr3g1438 515 Gene3D Cytochrome P450 21 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1438 515 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1438 515 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1438 515 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1438 515 PRINTS P450 superfamily signature 444 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1438 515 PANTHER CYTOCHROME P450 FAMILY FLAVONE SYNTHASE 9 508 - -
Apr3g1438 515 PRINTS E-class P450 group I signature 57 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1438 515 PRINTS E-class P450 group I signature 174 192 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1438 515 PRINTS E-class P450 group I signature 288 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1438 515 PRINTS E-class P450 group I signature 308 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1438 515 PRINTS E-class P450 group I signature 351 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1438 515 PRINTS E-class P450 group I signature 391 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1438 515 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1438 515 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1438 515 SUPERFAMILY Cytochrome P450 20 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1438 515 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 9 508 - -
Apr3g1438 515 Pfam Cytochrome P450 30 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1438 Apr-Chr3 29024071 29026946 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1438 28 508 Cytochrome P450 AT5G06900 41.463 2.73e-134 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1438 K23179 K24188 ag:BAA22423 709.909