Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1432 ATGGCAAGAATCAAAGTGTATGAGCTGAGGAACAAGACGAAAGCAGAGCTTCTGAACCAATTAAAGGATCTGAAAGCAGAACTTGCTCTTCTCCGTGTTGCTAAGGTCACCGGCGGTGCCCCAAACAAGCTCTCGAAGATAAAAGTGGTTCGGCTTTCGATAGCGCAGGTGCTGACCGTGATTTCTCAGAAGCAAAAAGCAGCGCTGAGAGAAGCTTACAAGAAGAAGAAGTACCTACCGTTGGATCTGCGTCCCAAGAAGACCAGAGCTATCAGAAGACGCCTCACAAAGCACCAGGAATCTTTGAAGACGGAGCGTGAGGAGAAGAAGGAAATGTATTTCCCAATTAGAAAATGTGCGGTAAAGGTGTAA 372 0.4677 MARIKVYELRNKTKAELLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKYLPLDLRPKKTRAIRRRLTKHQESLKTEREEKKEMYFPIRKCAVKV* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1432 123 PANTHER 60S RIBOSOMAL PROTEIN L35 1 123 IPR045059 GO:0000463|GO:0022625
Apr3g1432 123 Gene3D - 1 77 IPR036049 GO:0003735|GO:0005840|GO:0006412
Apr3g1432 123 Pfam Ribosomal L29 protein 8 64 IPR001854 GO:0003735|GO:0005840|GO:0006412
Apr3g1432 123 TIGRFAM L29: ribosomal protein uL29 8 64 IPR001854 GO:0003735|GO:0005840|GO:0006412
Apr3g1432 123 SUPERFAMILY Ribosomal protein L29 (L29p) 4 65 IPR036049 GO:0003735|GO:0005840|GO:0006412
Apr3g1432 123 Hamap 50S ribosomal protein L29 [rpmC]. 4 64 IPR001854 GO:0003735|GO:0005840|GO:0006412
Apr3g1432 123 PANTHER 60S RIBOSOMAL PROTEIN L35-LIKE 1 123 - -
Apr3g1432 123 CDD Ribosomal_L29_HIP 8 64 - -
Apr3g1432 123 Coils Coil 7 34 - -
Apr3g1432 123 Gene3D - 78 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1432 Apr-Chr3 28943837 28947926 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1432 1 123 Cytoplasmic Ribosomal Protein Gene Family AT2G39390 86.992 1.79e-70 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1432 K02918 - gmx:100789845 224.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1432 3 28943837 28947926 Apr3g1432 3 28943837 28947926 ECH