Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1431 ATGCCAAGAAAAGGAATGAGAAGCATTTTCTTCAAACCACCACTTCCTTCCCCGTCATCAGTCCCACCTCCCTCTCCTCTCCGCACCTTCTCAGACTCCTTAATGCAAGAAAACATAGAAACAGCGGAGTCACTCATAACAAAATGGGACTATTCCAACGCCAATTCCCAATCCAAAATCACTACGTCTCTTTTCAGTGGCACGCGCCACGAAGCCGAACAGTACCTAAATGCCGTTAAGGGACTACAATCCGCTATGCAGTACCTCGTCGCACAGGATTCCACCTCCACTTCCCTCGTGCGACCTCAGTTCTTGATGCAACTCGCAATGAACACGCTCGAGAAAGAGTTCTACCAGATTTTATCTTCTAACAGGGAACACTTGGATCCCGAAACCGTCTCCGCCCGTTCCTCCGTCGATCACAGAAGCAGCGTCTCCGATTGCGACGACGAAATATCCGAAAATGAGTTTCGCGTCTCCGAGACCGAGAGGGTTTCCATGCTCGCCATGGCCGATTTGAAGGCCATCGCCGAATGTATGATTTCGTCTGGATACGGCAAAGAGTGCGTCAAGGTTTACAACGTTATGAGAAAATCAATCGTCGATGAGGCACTTTACCATCTCGGAGTGGAACGGTTGAGTTTCTCTCAGGTTCAAAAAATGGATTGGGAAGTGCTCGAGTTCAAGATCAAGAGTTGGTTAAACGCCGTTAAAGTCGCCGTTGGAACTCTGTTTCACGGCGAGAGGATCCTCTGCGATCACGTCTTCGCTGCCGATTCAGGGAAGAGAATCGCCGAATCCTGTTTCACCGAAATTACGAAAGACGGTGCCGCGTCGCTGTTTGGATTCCCGGAAATGGTGGCAAAGTGCAAGAAAACGCCGGAAAAAATGTTCAGGACTTTGGATTTGTACGAAGCCATCTCAGACCACTGGCCTCAAATCCAACATATCTTCTCCTTCGAATCAACTTCGAATATTCGCTTGCAGGCCGTTACATCAATGGCCAAACTCGGCGAGGCCGTTAGAACGATGCTAACGGATTTCGAAACCGCGATTCAGAAGGATTCCTCCAAGAAACCGGTACCCGGCGGTGGGGTTCACCCTCTCACGCGCTATGTGATGAACTACCTCACGTTCCTCGCCGATTACAGTGGCGTGCTGGTCGATATAATCGCCGATTTGCCGCAATCACCGATGCCGGAATCTTACTATCGCAGCCCGATGCGTGAGGAAAACACGTCGGCTTCGGAGTTATCGGAGCGAATCGCGTGGCTCATACTCGTCGTGCTTTGCAAGCTCGACGGCAAAGCGGAGCTGTACAAGGACGTGGCGCTCTCTTACCTGTTTCTCGCGAATAACATGCAATACGTTGTCGAAAAGGTTCGCAAATCCAACCTAGGATTCCTTCTCGGCGAGGATTGGTTGGAGAAGCACGAATTGAAGGTTGGAGAGTACGCGTCCAAGTATGAGCGCGTAGGGTGGAGCGCGGTGTTTTCATCGTTGCCGGAAAATCCCGCGGCGGAGAAAGCCAGGGCCTGCTTCTTGAGGTTCAAGGCTGCGTTTCAAGAAGCGTGTAAAAAACAAAGCTCGTGGATCGTATCCGACCCGAAACTGCGTGACGAAATCAAAGCGTCGATAGCTTCGAAGTTGGCGACCAAGTACAGTGAATTCTACGAGAAGAACCGGGTCGGGTCGGAGTCTGTCATTAGAGTTTTACCCGATGAAATTGAAAAATACTTGTCTGACATTTTGTATGGGAACGGCATTGGAGATTCGGGTAGCGTCTAG 1788 0.5039 MPRKGMRSIFFKPPLPSPSSVPPPSPLRTFSDSLMQENIETAESLITKWDYSNANSQSKITTSLFSGTRHEAEQYLNAVKGLQSAMQYLVAQDSTSTSLVRPQFLMQLAMNTLEKEFYQILSSNREHLDPETVSARSSVDHRSSVSDCDDEISENEFRVSETERVSMLAMADLKAIAECMISSGYGKECVKVYNVMRKSIVDEALYHLGVERLSFSQVQKMDWEVLEFKIKSWLNAVKVAVGTLFHGERILCDHVFAADSGKRIAESCFTEITKDGAASLFGFPEMVAKCKKTPEKMFRTLDLYEAISDHWPQIQHIFSFESTSNIRLQAVTSMAKLGEAVRTMLTDFETAIQKDSSKKPVPGGGVHPLTRYVMNYLTFLADYSGVLVDIIADLPQSPMPESYYRSPMREENTSASELSERIAWLILVVLCKLDGKAELYKDVALSYLFLANNMQYVVEKVRKSNLGFLLGEDWLEKHELKVGEYASKYERVGWSAVFSSLPENPAAEKARACFLRFKAAFQEACKKQSSWIVSDPKLRDEIKASIASKLATKYSEFYEKNRVGSESVIRVLPDEIEKYLSDILYGNGIGDSGSV* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1431 595 Pfam Exo70 exocyst complex subunit 231 582 IPR046364 GO:0000145|GO:0005546|GO:0006887
Apr3g1431 595 MobiDBLite consensus disorder prediction 1 25 - -
Apr3g1431 595 SUPERFAMILY Cullin repeat-like 54 583 IPR016159 -
Apr3g1431 595 Gene3D Exocyst complex component Exo70 50 589 - -
Apr3g1431 595 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 8 587 - -
Apr3g1431 595 PANTHER EXOCYST COMPLEX PROTEIN EXO70 8 587 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1431 Apr-Chr3 28932806 28935192 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1431 19 587 EXO70 exocyst subunit family AT5G59730 49.249 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1431 K07195 - gmx:100810579 952.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1431 3 28932806 28935192 Apr3g1431 3 28932806 28935192 ECH