Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1425 ATGTGGGATTGCAGAGAATTTGGTTTATTTATCTGTGCTTTATTGATCTTGCCCTTGGTATGTTTTTCTGCCAACTTTGTTCCTCAAGACAATTACCTAATAAACTGTGGAGCACCTTCCAATACTTCTATAGATAGCCGCAATTTCACTGCTGATAGTTTCTACAATAATTTCCTTTCCACTCAACACGATATTCTTGCCAACACCTCCTTAAAATCAATTACTTCCTCCGATGATTCACCCCTCTATCAAACGGCAAGAATTTTCACTGCACCCTCAAAGTATACTTTCCCTATTAACAAAAAGGGGAGGCATTGGATCCGTCTTTATTTCTTTCCATTTGCATATGAAAAATACAATTTGAGTGCTGCAAATTTTGCGGTTACCACCCAAAACAGTATTCTTCTCAGTAACTTCAGTGTGCAGAAAAATCCTGTTATGAAGGAGTACTCTCTAAATGTGACCTCAGACACCCTTGTAATGACATTTATCCCTTCTAGCAGTTCCACTGCTTTCGTGAATGCCATTGAAGTTGTTTCAGTCCCTGATGACCTTATTGCTGATGATGCTACCACCTTAAATCCACCAGGAAGCTACTCTGGCTTGTTGACACAGGCACTGGAGACAGTTTTCAGGGTTAACATGGGTGGTCCAACTGTCTCCTCCAGCAACGACACACTTCAACGAACTTGGATTCCGGATGAAAGATTCCTTATACAACCTAACTTAGCCAATAATTTTTCAAACGTCGCTGCTGTTAAATATGTAAAGGGTGGGCCAACAGAAAACATTGCTCCACCTTCTGTCTATGGCACTCTAACACAGATGAATTCGATCAATGATCCTCGTAGTAATTTCAATGTGACTTGGCAGTTTGATGTGGAACCTCAATTTCAGTACCTTATTCGGCTTCACTTCTGTGATATCATCAGTAAAGGTCTCAATGCACTCTACTTCAATGTTTACATTAACTCCTTGTGGGCTTCTAAGGATCTTGATCTCAGTATGGTAAATAATAATGTTTTGGCTACTCCATATTATCTGGATTTGATTACAGCTCCCTCTGTTAGCAATAAAATTTTTGTAAGTATTGGCCCTTCTGCTCTGAATACAGATTATCCTAATGCTATTTTGAATGGGTTGGAGATCATGAAAATAAACAACTCTATGAGCAGTCTTAGTGAGTCAATTACTGTGCCTGTGACTAGTACTACTGGTTCAAGTTCTAAGAAAGTTGGCATGATATTGGGTGTGAGTATTGGAGCATTTAGTGCAGTGGTCTTAGTTGGAATTTTGTTTCTACTATGCAAGAAAAGAAGACGTTTAGAAAGACAAGGGCATTCGAAAACATGGATTCCCTTATCAATCAATGATGGAACTTCTCACACCATGGGGAGTAAATACTCTAATGGCACAACAGCAAGTGCTGCTTCAAACTTTGGGTACCGCATCCCTTTCATTGCGGTTCAGGAGGCTACAAACAGTTTTGATGAGAGTTGGGTTATTGGCATTGGTGGTTTTGGTAAAGTATACAAGGGGATGTTAAATGATGGCACTAATGTTGCCGTTAAGAGGGGGAATCCACGGTCCCAACAAGGTCTTGCAGAGTTCAGAACTGAAATTGATATGTTGTCTCAGTTTCGCCATCGCCATCTTGTATCATTGATTGGGTATTGTGATGAAAAGAATGAAATGATCTTGATATATGAATATATGGAGAAGGGAACTCTCAAGAGTCATTTGTATGGTGCAGGTCTCCCAAACTTAAGTTGGAAAGAGAGACTTGAGATATGCATTGGAGCAGCTAGAGGACTGCATTACCTTCATACTGGCTATGCTAAACCGGTTATACACCGAGATGTGAAATCTGCAAATATCCTGCTTGATGAGAACCTCATGGCAAAAGTTGCTGATTTTGGGCTGTCAAAGACCGGGCCTGAAATTGATCAGACGCATGTGAGCACAGCTGTCAAAGGGAGTTTTGGGTATCTTGATCCTGAGTATTTCAGGAGACAACAGCTAACAGAAAAGTCAGACGTGTATTCGTTTGGAGTAGTTCTGTTTGAGGTTCTTTGTGCAAGACCTGTAATTGATCCTTCACTTCCTAGAGAAAGGGTGAACTTGGCAGAATGGACTATGAAATGGCAGAAAAGAGGGCAATTGGAACAAATAATAGATCCAACACTTGCAGGGAAAATAAGACCGGATTCTCTTAGGAAGTTTGGAGAAACTGCTGAAAAATGCTTGGCTGACTTTGGTGTTGACAGACCTTCTATGGGAGATGTCTTGTGGAATTTGGAGTATGCTCTCCAACTTCAAGAGGCTGTTGTTCAAGGTGATCCTGAAGAAAACAGTACCAATATGATTGGTGACCTCTCTCCACAGGTTAACAACTTCAACCATGAAGTAAGTGTTTCTGCTGTACAATTAGAAGCTACTAGTCTGGATGATCTTTCTGGTGTATCTATGAGTAAGGTATTCTCACAACTGGTGAAGTCTGAAGGGAGGTGA 2511 0.4062 MWDCREFGLFICALLILPLVCFSANFVPQDNYLINCGAPSNTSIDSRNFTADSFYNNFLSTQHDILANTSLKSITSSDDSPLYQTARIFTAPSKYTFPINKKGRHWIRLYFFPFAYEKYNLSAANFAVTTQNSILLSNFSVQKNPVMKEYSLNVTSDTLVMTFIPSSSSTAFVNAIEVVSVPDDLIADDATTLNPPGSYSGLLTQALETVFRVNMGGPTVSSSNDTLQRTWIPDERFLIQPNLANNFSNVAAVKYVKGGPTENIAPPSVYGTLTQMNSINDPRSNFNVTWQFDVEPQFQYLIRLHFCDIISKGLNALYFNVYINSLWASKDLDLSMVNNNVLATPYYLDLITAPSVSNKIFVSIGPSALNTDYPNAILNGLEIMKINNSMSSLSESITVPVTSTTGSSSKKVGMILGVSIGAFSAVVLVGILFLLCKKRRRLERQGHSKTWIPLSINDGTSHTMGSKYSNGTTASAASNFGYRIPFIAVQEATNSFDESWVIGIGGFGKVYKGMLNDGTNVAVKRGNPRSQQGLAEFRTEIDMLSQFRHRHLVSLIGYCDEKNEMILIYEYMEKGTLKSHLYGAGLPNLSWKERLEICIGAARGLHYLHTGYAKPVIHRDVKSANILLDENLMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPSLPRERVNLAEWTMKWQKRGQLEQIIDPTLAGKIRPDSLRKFGETAEKCLADFGVDRPSMGDVLWNLEYALQLQEAVVQGDPEENSTNMIGDLSPQVNNFNHEVSVSAVQLEATSLDDLSGVSMSKVFSQLVKSEGR* 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1425 836 ProSiteProfiles Protein kinase domain profile. 496 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g1425 836 Gene3D - 205 388 - -
Apr3g1425 836 Gene3D - 30 182 - -
Apr3g1425 836 Gene3D Transferase(Phosphotransferase) domain 1 572 789 - -
Apr3g1425 836 Gene3D Phosphorylase Kinase; domain 1 458 571 - -
Apr3g1425 836 ProSitePatterns Serine/Threonine protein kinases active-site signature. 616 628 IPR008271 GO:0004672|GO:0006468
Apr3g1425 836 Coils Coil 828 836 - -
Apr3g1425 836 ProSitePatterns Protein kinases ATP-binding region signature. 502 524 IPR017441 GO:0005524
Apr3g1425 836 SMART serkin_6 496 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g1425 836 PANTHER OS07G0166700 PROTEIN 19 828 IPR045272 GO:0004714|GO:0006468
Apr3g1425 836 Pfam Malectin-like domain 34 386 IPR024788 -
Apr3g1425 836 CDD STKc_IRAK 502 767 - -
Apr3g1425 836 Pfam Protein tyrosine and serine/threonine kinase 501 692 IPR001245 GO:0004672|GO:0006468
Apr3g1425 836 SUPERFAMILY Protein kinase-like (PK-like) 475 767 IPR011009 -
Apr3g1425 836 PANTHER RECEPTOR-LIKE PROTEIN KINASE THESEUS 1 19 828 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1425 Apr-Chr3 28839139 28842752 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1425 5 836 Receptor kinase-like Gene Family AT3G46290 64.839 0.0 1106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Apr3g1425 Malectin_like 8.9e-39 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1425 - - gmx:100806488 1470.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1425 3 28839139 28842752 Apr3g1425 3 28839139 28842752 ECH
Apr2g2254 2 27654130 27657850 Apr3g1425 3 28839139 28842752 ECH
Apr2g2254 2 27654130 27657850 Apr3g1425 3 28839139 28842752 PCT