Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1381 ATGGGAAAGAAGCCGAAAATAGTTCTTCCGCCGGAACTACCGCCGGAGATCCCAGACGACGAAGTTGAGGTTTCCGACGATGACTTCCAATTCGTCAAGGAAAACCGCGGCTATGCCTCCTTGCTTTCCAGCTTGGACACCTATTCAATCACCAAGCACGTTACACGGGTTGCTGATGCCAAAGACGATGCATTGGAAAAACTTTATGAGAAACGCATGCGAAAGAATGCTCTCAACAAAGAAAAAGAAGAAACTGGTTTGCAGGTTGATCGTGTAGATGCTCTTCCAATCAAGACATTGGATGGAACACTCTATTACCGGACAGGTACAAAGACAGAATCTGAGAATGATCCAAGTGAAGAGGGAGCCGAAGAGGATGTCAATGCAGACAAAGGTGTAGTGAAGCTTACTAAGGCTGAACGGAGAGCCAAACTTAAGAAAATGAAAAAAGAGGGGAAAAAACAAGGGAAAGAGGTGGCTAAAGCAGAAGTGGAAGAAACACCGCAAGCAGCAGTACTGGCTGAGGTAAAAGAAGATCTTACTGCTGAGGAGGCATTTGAAAGTAAGAAGTGTAAACTTGCAGAATTGGGGAATGCCTTGCTTACAGACCCAGAGTCCAATATTAAATTTCTGAAGGAGATGGTGCAGATATCTAAAGATAATGATCATACCATTGTTAAACTTGGACTTCTATCCCTCTTGGCTGTTTTCAAAGATATTGTCCCTGGCTATCGGATCAGGCTTCCTACTGAAAAGGAACTAGAAATGAAGGTTTCAAAGACTGTTAGAAAGATGCGTTATTATGAATCAACTCTGCTTTCAGCATATAAGGCATACTTGCAAAGGCTGATAGCCTTAGAAAAGAAGCCTTTATTTCAGCTTGTAGCAGTTCGTTGTATTTGTTCTTTGCTTGATGCGAATCCTCATTTCAACTTTTGGGAAAGCTTGTTGGATGCTACTGTCAGAAACATAAGCTCTACTAATGAAGCCATTAGGAAAGTTTGTTGTTCGACAATTAAATCGCTCTTTATGAATGAGGGTAAACATGGTGGTGAAGCTACCGTGGAGGCTGTTAGATTGATTGCTGATCATGTTAAAGCTCATAATTGCCAATCGCACCCAGATTCTGTTGATGTTTTCTGGTCTCTTTCATTTGATGAGGATCTTGTGAAGTCTGCAAAGATAGAAGAGGATCAGAAATTAAAAAGCAAGAAAAGTAAGAAAAGGAAAAACTTGGAGGCTTCAAATAAGCTGGTGGAGAATGATAGAAAGAAAATTAGGCAAGAACAGATTTCTAAGACAAGAGAGGAGGTTGAAGCTGATTACAAGGCTGCATCCTTTACCCCAGATGTTAGGGAGAAGAGACAAATGCAAACTGAAACACTATCTGCTGTCTTTGAGACATACTTCCGCATATTGAAGCATACAATGCAGTCCATTGGTGCCAGGTATGTTTCTATATCTTCAAACCCTGGGGCATTATCTGCTGCAGCAGAATCCCTCCCATTGCTTGCTCCATGTCTGAAAGGACTGGCAAAATTTTCTCATCTGATTGACCTTGATTTCATGGGTGATTTAATGAACCATCTGAAAGTACTTGCTTCTGGAAGTAGTAACTCAGGCAACACTTCTGACAAGTCTTCTAAATGTTTGACTGTATCCGAGCGTCTCCAATGTTGCATTGTTGCTTTTAAAGTGATGAGGAACAATCTCGATGCCTTGAATGTTGATTTACAGGACTTCTTTCTCCATCTTTATAATCTTCTACTTGAATATAGGCCAGGAAGAGATCAAGGGGAGGTGTTAGCAGAAGCTTTGAAGATAATGTTGTGTGATGATAAGCAACATGACATGCAGAAAACTGCTGCATTTATAAAACGATTAGCAACATTTTCACTTTGCGTGGGATCTGCAGATTCCATGGCTGCCTTGGTGACCGTGAAGCATCTCCTTCAGAAGAATATAAAATGCAGAAATTTGTTGGAAAATGACATTGGAGGGGGCTCTGTTTCTGGCACAATTCCTAAATATCAACCATATTCGACAGACCCCAATTTAAGCGGTGCCCTTGCATCAGTACTTTGGGAACTAAATCTTTTGTCAAAGCATTATCATCCAGCTATATCAACAATAGCCTCGGGCATTTCAAGCATGAGTGCTGCACATAACCAGCTCCTTTTATCCAAGTCCTCTCCTCAACAAGCTTTCAAGGAAATGTCTCTGGACCAGGAATTATGTTTCAGACAAAGTGGCAGTATAAAATTAAATAACAAGAAGAGGCGAACAAATGGCTCTCCTACATCACCTTCCATTGGCTCTTCAACAGTTATGAGTTCATTCGACGACAATGAGTTGCGAATGAAACTTAGTTCTCATTTCATGCTTCTTCATGACATCAAGGAGAATGAAAAATTGAGAAGGGAATTGGATAGGACTGCACTATCACTACAGCTATTTGAACAATATAAGAAACAAAAGAAACGATCAAAACCAAGTAGATGA 2502 0.4081 MGKKPKIVLPPELPPEIPDDEVEVSDDDFQFVKENRGYASLLSSLDTYSITKHVTRVADAKDDALEKLYEKRMRKNALNKEKEETGLQVDRVDALPIKTLDGTLYYRTGTKTESENDPSEEGAEEDVNADKGVVKLTKAERRAKLKKMKKEGKKQGKEVAKAEVEETPQAAVLAEVKEDLTAEEAFESKKCKLAELGNALLTDPESNIKFLKEMVQISKDNDHTIVKLGLLSLLAVFKDIVPGYRIRLPTEKELEMKVSKTVRKMRYYESTLLSAYKAYLQRLIALEKKPLFQLVAVRCICSLLDANPHFNFWESLLDATVRNISSTNEAIRKVCCSTIKSLFMNEGKHGGEATVEAVRLIADHVKAHNCQSHPDSVDVFWSLSFDEDLVKSAKIEEDQKLKSKKSKKRKNLEASNKLVENDRKKIRQEQISKTREEVEADYKAASFTPDVREKRQMQTETLSAVFETYFRILKHTMQSIGARYVSISSNPGALSAAAESLPLLAPCLKGLAKFSHLIDLDFMGDLMNHLKVLASGSSNSGNTSDKSSKCLTVSERLQCCIVAFKVMRNNLDALNVDLQDFFLHLYNLLLEYRPGRDQGEVLAEALKIMLCDDKQHDMQKTAAFIKRLATFSLCVGSADSMAALVTVKHLLQKNIKCRNLLENDIGGGSVSGTIPKYQPYSTDPNLSGALASVLWELNLLSKHYHPAISTIASGISSMSAAHNQLLLSKSSPQQAFKEMSLDQELCFRQSGSIKLNNKKRRTNGSPTSPSIGSSTVMSSFDDNELRMKLSSHFMLLHDIKENEKLRRELDRTALSLQLFEQYKKQKKRSKPSR* 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1381 833 Coils Coil 65 85 - -
Apr3g1381 833 MobiDBLite consensus disorder prediction 756 777 - -
Apr3g1381 833 Pfam Nucleolar complex-associated protein 189 279 IPR011501 -
Apr3g1381 833 MobiDBLite consensus disorder prediction 401 432 - -
Apr3g1381 833 MobiDBLite consensus disorder prediction 412 432 - -
Apr3g1381 833 PIRSF Noc3 2 813 IPR016903 -
Apr3g1381 833 Coils Coil 409 429 - -
Apr3g1381 833 PANTHER NUCLEOLAR COMPLEX PROTEIN 3 3 785 IPR016903 -
Apr3g1381 833 MobiDBLite consensus disorder prediction 1 21 - -
Apr3g1381 833 SUPERFAMILY ARM repeat 205 637 IPR016024 -
Apr3g1381 833 MobiDBLite consensus disorder prediction 108 128 - -
Apr3g1381 833 Coils Coil 145 165 - -
Apr3g1381 833 Pfam CBF/Mak21 family 557 712 IPR005612 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1381 1 809 Core DNA Replication Machinery Family AT1G79150 58.680 0.0 911
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1381 K14834 - gmx:100776136 1320.45