Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1375 ATGGCTTCCTCCAACAATCCCAAATCAGAAAAGAAGAAAATAAAAAACCGAGAAATCTCCATAACCAAAAGCAAAAGTAAAACGAAGAAGGATAGAGACTTAGAGAAAGAGAAAGAGAACAAAAAGAAGAATAATAAGAAACTGAAACTCAGCAATGGCAAGTCGAAACGACAAGAAGAGGAAGAGCAAGTAGGAGGAGATGAAGAAGAGGCGAAAACGCACGTTTTTCCGATGAATCGTATCAGGACGATGATTAAGGGCGAAGATCTGCGTGCTTCGCAGGAAGCTCTACTGGCCATTAACAAAGCAACGGTGGCTTTCTATTCTTTGCGTTTTCAGTTTCTGTTACCAATTGCGCCTTTTCCTTCATCGTTTGCCTTTTCCTTGCAGGAGAAGTTTCTTGAACAATTCACACAGGACGCTTATGCTGGTTCTGTTCAGGATCGTAAGAAATCTCTGAATTACAAACATTTAGCATGTGTTGTAAGTAAGCAAAGGAGATATGACTTTCTTTCTGATTTTGTTCCTGAGAAAGTCAGGGCTGAGGATGCATTAAGAGAGAGAAATTCAGGAGGGAATGGAGGAGGTTAG 591 0.4061 MASSNNPKSEKKKIKNREISITKSKSKTKKDRDLEKEKENKKKNNKKLKLSNGKSKRQEEEEQVGGDEEEAKTHVFPMNRIRTMIKGEDLRASQEALLAINKATVAFYSLRFQFLLPIAPFPSSFAFSLQEKFLEQFTQDAYAGSVQDRKKSLNYKHLACVVSKQRRYDFLSDFVPEKVRAEDALRERNSGGNGGG* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1375 196 Coils Coil 31 51 - -
Apr3g1375 196 MobiDBLite consensus disorder prediction 1 73 - -
Apr3g1375 196 SUPERFAMILY Histone-fold 130 178 IPR009072 GO:0046982
Apr3g1375 196 MobiDBLite consensus disorder prediction 8 73 - -
Apr3g1375 196 Gene3D Histone, subunit A 5 177 IPR009072 GO:0046982
Apr3g1375 196 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 6 191 - -
Apr3g1375 196 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR AND ARCHAEAL HISTONE FAMILY PROTEIN, EXPRESSED 6 191 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1375 40 159 CCAAT-HAP5 Transcription Factor Family AT1G07980 31.967 4.22e-11 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1375 - K03506 gmx:100500588 191.43