Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1371 ATGTTCAATAAGGCTCTTTCTTTTGCCAAAGCAATGGAGTGCTGTAATTGCTTTGGGTTCATTAGGAGACTGAGCCGTCAAAGTCAAAGGTCTAAGCCTGCTATCAACAATAATCTCTCCCAGGAGCTGTTGTTGGATGACGACATTGAAGATGAAGAGCACTTGTATAATAATGACGACGCCAATACCACTAGCGGAGATGACAGTGAGGAAAAAACCCGTCCCAAGAAATCGGAAGAAATTTTGAACATGAGAGTAGAGAATGGCATGATTTGTAGGCAGTTTCCCGTTAAGGAGACTCACAAAGTTGTTCGCAGAGAGGATGAAAATGGAAACAAGATGATAAATGAGTATATTCGTGAATATAAGATTGGTTCTGGTAGCTACGGGAAAGTGGCTCTTTATCGAAGCTCTGTTGATGGAAAGCATTATGCAATTAAGGCCTTTCATAAGTCTCATTTACTGAAGCTTCGAGTTGCACCCTCAGAAACTGCCATGACTGATGTACTACGTGAGGTTCTCATTATGAAAATGCTGGAACATCCGAATATAGTGAATCTCATTGAGGTGATTGATGACCCGGAGTCAGATCGCTTCTACATGGTACTTGAATATGTGGAAGGCAAGTGGGTTTGTGAGGGTTCGGGTCCCACTTGTGGCTTAGGTGAAGAGACTGCTAGGAGATACTTGCGTGATATAGTTTCTGGATTAAGATATCTCCATGCTCATAATATAGTACATGGGGATATTAAACCAGATAATCTGTTGATTACTCGTCATGGTACAGTGAAGATAGGAGATTTCAGTGTCAGCCAAGCTTTTGAGGATGATAATGATGAGCTTCGGCGATCACCTGGAACTCCGGTTTTCACAGCACCAGAATGTCTTACCTATCATGGTAAAGCTGCAGACACATGGGCAGTAGGGGTTACTTTATACTGTATGATATTGGGTGAATATCCTTTTCTTGGAGACACACTTCAAGATACCTATGACAAAATAGTCAATAATCCTTTAGTACTCCCAAATGATATGAATCCGCGACTGAAGAACTTAATAGAAGGATTACTTTTCAAAGATCCAAGAGTAAGGTTGACTTTGGGTGATGTTGCGGAAGATAGCTGGGTTATTGGAGATGATGGGCCAATTCCTGAGTACCTTTGTTGGTGCAAAAGGAAGAGCTTGGGGATTGAAGACAATGATGAGAGCAATGTGCTTGCTTGA 1224 0.4167 MFNKALSFAKAMECCNCFGFIRRLSRQSQRSKPAINNNLSQELLLDDDIEDEEHLYNNDDANTTSGDDSEEKTRPKKSEEILNMRVENGMICRQFPVKETHKVVRREDENGNKMINEYIREYKIGSGSYGKVALYRSSVDGKHYAIKAFHKSHLLKLRVAPSETAMTDVLREVLIMKMLEHPNIVNLIEVIDDPESDRFYMVLEYVEGKWVCEGSGPTCGLGEETARRYLRDIVSGLRYLHAHNIVHGDIKPDNLLITRHGTVKIGDFSVSQAFEDDNDELRRSPGTPVFTAPECLTYHGKAADTWAVGVTLYCMILGEYPFLGDTLQDTYDKIVNNPLVLPNDMNPRLKNLIEGLLFKDPRVRLTLGDVAEDSWVIGDDGPIPEYLCWCKRKSLGIEDNDESNVLA* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1371 407 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 1 404 - -
Apr3g1371 407 CDD STKc_LKB1_CaMKK 124 376 - -
Apr3g1371 407 ProSitePatterns Serine/Threonine protein kinases active-site signature. 245 257 IPR008271 GO:0004672|GO:0006468
Apr3g1371 407 SUPERFAMILY Protein kinase-like (PK-like) 110 387 IPR011009 -
Apr3g1371 407 ProSiteProfiles Protein kinase domain profile. 118 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g1371 407 Pfam Protein kinase domain 120 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g1371 407 ProSitePatterns Protein kinases ATP-binding region signature. 124 147 IPR017441 GO:0005524
Apr3g1371 407 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 1 404 - -
Apr3g1371 407 Gene3D Transferase(Phosphotransferase) domain 1 217 382 - -
Apr3g1371 407 SMART serkin_6 118 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g1371 407 Gene3D Phosphorylase Kinase; domain 1 112 214 - -
Apr3g1371 407 MobiDBLite consensus disorder prediction 56 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1371 Apr-Chr3 28210661 28217021 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1371 124 383 CBL-interacting serine-threonine protein kinases AT5G35410 33.840 8.88e-43 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-LKB Apr3g1371 Pkinase 1.5e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1371 K00908 - gmx:100789178 707.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1371 3 28210661 28217021 Apr3g1371 3 28210661 28217021 ECH