Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1345 ATGAAAATGTCACATGACACTGGTTCTGGTCGCGTTATCGATAAAGGACCAATCACGAGGTCTGCCAGAGAGGCATTGTCGAAGAAAGTGGTTGTGAACCATTCTACCACTCCTCATCGTAAGTCCGAACGGCTTGAGAAGAGGACACCGCCAAAGCTTGCAGTTAGCACCAAATCTGAGAAGCAGAAGAAGAGGATGGAGAGTCCGAGTCCTTTGAGAAGATCTGAGAGAACTAGGAACGCTTCTCTTTCGGATCCTTCAGTTTCTAAATCCAAAAGTTCGGGTTCGAAGACGCCTTCGAAAAAGCACGTCGCTGCGAAGCACTCGGCAATTGAGGCTAGCGATGGCAGCGAGGATGAGGAACGTGACATGGAAGCTTCCTCGAAAATTAAAGTTAAGAGAATGGATGCGCGTGCGTATCGTGCTATCTTTGAACAAGCAAACAAAGATTGCCTTGGTGAGTCAAGTGGGGTAGATAGGTCAACTAAAGAAGGTGATGATGAGGGTGGGGGCAGGATTGATGAATGCTTTAAAGGAAATTGTTTAGATTCTGCCAAGGATGATAAAGGTAGTTTGCCACCTGAAGATGCCAAAGGCAAAGAGATGAGAGCTGGGTCTAAGTTGAGTGGGCCCGTGAAAGAACTATTAGAGAATAATGGTTCTGCTGGTTCATTGCTACCATCTAATGCCACAACTCATGAGGCCAGTGGAGCACCTGAAAAGGTTCAGTCTGGTTCCTGCAAAGAGGAGATGTCAGGGTCAAGGGATTCCATTTTAAATGAAAATTTGATTAGCAGATGTGCTGAGCATGAGAAGGGTGAAAAATCAATATCTTCTAAGCGAAAAAAAACTATGGTGGACATGCATTCAGATGATTCTGATGTGGATAGGTCAACTAAGGAAGGCAATGGCGAGGGTGGGGGCAAGACTGATGAGTGCTTTAAAGGGAACTGTTTATATTCTGCCAAGGATGATAAGGGTATTTTGCCACCCGAAGAAGCCAAAGGTGAAGAAATGAGTTCTAGGCTAAAGTTGAGCGGGCTTGTGAAAGAACTGTTGAAAAATAATGTGACTGTTGGTTCATTGGTACCATCTAATGCTGCAACTTATGAGACTAGTGGGACACCTGAAAGGGTTCAGCCTGATTCCTGCAAAGAGGAAACGTCACAGATGTCAGGGTCAAGGGATTTCATTTTAAATCAAAATTTGATAAGCAGATGTGCTGAGCGTGATAAGTGTGAAAAATCAATATCTTATAAGAGAAAAAGAACTATGGTAGACATGCATTCAGATGCTTCTGATGTGGATAGGTCAACTAAGGAAGGTGACGATGGGAGTGGGGGCAAGGCTGATGGGTGTTTTAAAGGGAATTGTTTAGATTCTGCCAAGGATGATAAGGGTATTTTGCCACCTGAAGATGCCAAAGGTGAAGAGATGAGTTCTGAGCCAAAATTGAGTGGGCCTGTGAAAGAACTGTCGAAAAATAATGTGACTGTTGGTTCATTGGTACCATCTAATGCTGCAAATCATGAGACCGGTGGAACACTTGAAAGGGTTCAGTCTGATTCGTGCAAAGAGGAAACATCACAGATGTCAAGGTCAAGGGATTTCATTTTAAATGAAAATTTGATTAGCAGATGTGCTGAGCTTGATAAGGGTGAAAAATCAATATCTTATAAGAGAAAAAGAACTATGGTAGATATGCATTCAGATGCTTCTAATACATTGGTTGATGATGGCAATGGCAACTTGATGGAGGATGCTTGCTCATCAAGGATATGCAGCAATCTTGTGGGGACCAATGGGCCATGTTCCAAAAGGATAAGGCAGATCTCTTTACCCGATGTGCAAAGGGATCAGAGGAAATTGACCAATAATGTTGATCATTCTTCTCCAAAATCTAATGGTGAAAAATTGTCTACTAGGAAGAAGGAAGGAAAATCTGGAGGTTCAGTGGAATCCAAGATAACTGAAGGGAACATTGTTGAACCTGAGAAAATAAGGACACAGCAGAGGAACTTACATCTTTTACTGAAGCCAGAGATAGCAAATCTTTGTGAAATTCTTTGTCTTCCGGACAAAGTCAAGAGTATGGTTGAAAGTTGTCTTGAATATACTATGAACAATTATCAGATCTGTACTGAACCAGTGTCAATATTACAGGCTTTTCAATTATCTCTGTGTTGGACTGCTGCTGCTTTGCTAAACCACAAACTCAACTTTGAAGCTTCCCTCTCACTTGCAAAGCAGCACTTGAATTTTGACTGTAAGAAAGAGGTGGTGGATGAAATCAATTCAAGGCTTTGGGATCTGAAAGAAAATTTTTTGTCCCTCACAGGAAATTCTAAAGTCACTGGCTCAACCAAAGTGTCTGAATCATCAAATGGGGTTTATTCATATACAGAAGTAACACCAGTGGTTGAATTGCCCGAAAGAAATAATTCCAAAAATATTGAAAACATTCAGAACCGTACACACCAGTGGGACGAGCTACTTCTGATGCAACAAAAAGAGAAGCAAAAATTGAAAAAAGATATTGAGATTGAAAATGCTGATTTTGTGAGGAGGTACAAAATTGAGTGGGCAGGTATTCGATCCTATTCTCCTAATGATGTGATGAGAAAAGAAAAACTCAAGGTATTCAATAGTGAATATGTTAAGAGAATTGCAGAATTGGAAAGGCAGCATGATATACGTCTAAAGGATCTTGAGGCCATGCAATTAGAAGCAAGGCAGAAGTTCCCAGAATCTTCAGTTCCTGATGATTTGTTAAATACAGCTGCTTCAAAGGAACTTGGGACTAGGCCTGAATCCTTGCAAACACATGATCAAGCCCAGAATCATAATGCTCCCAAAGCCATTGTGTCTGATCATGTTGCTGAAAGAAAGAGTTTTGATATAGTTGAAGTTGTGACAAGAGCTGGAACTGGGGTTGGATTATCTGAAGGTCCCAACACTAATTCCTGTGTAATTGTACCATGCAGTAGCCCAGTTGAACTGGAAAATCCTCTGGTCAAACATACTGGTGCTAGTGAGATGGACATAGTGGCCTCCAAAGATGGACCAGGATCTGAAAATAAGTGCAATCATGCTGCTGAAAATGAATATGACAGTCAAGGAAATGTCTCTAAGCCTGCCAACTCCAGAGAACAGTGTTCTGATGGAGCTATTAACATGGAAGACAAAAGTGAAGGGGGTGTAAATTTCAGTTGTCAATCTCGTGATGACTGTGGGCAGGATGCTACACCATCAGTTCCTCTTCCATCTAATGAAGAGACTCATGAGGGGAAAACATCAGGTGTTCTGAGTGGAGAGGTGGCTCTTGCAGTGTGTAAAACCAGCAGTTCAAATAATGATCATGTTGAAGTTCCTTCTTCTGGCCAAGGGACACTTAGTGGAACAATAGTGAGCAAGCCTGTTTGTGGTTTATCAATAGAAGTCAAGGCTAATGGTTCCTATGATGATGTGAAGAATATGACCCCCTTGAATTCTGAATCATCTGAAGAACATATCCCATGTATAAGTACAATGTGCATGTCAAATTGTGAGAATGCTGCACAAATCCATGAGGTTGATGGCAATAATGGTTCCAATAATGCTGGGACTCTGAACTCAACTTTGTCTGATGAAATAATTTCCTCCCAGAATCCAAAATCACCTCAAGACCATGCCCATAATGTAAATATCATGTGCTTGCCAAATTATGAGAATTCTGTACAGATCCATGATGATGATGATGACGGCAGGGGTTCAAATAATGTTATTCTGAATTCACCTTTGATTGATGAGAGAAATGCTCATGGGACCATAGTATTAAATAAAGATGTACAGGTGAAAATGTCCGAGACTGTCAATTTTACTCCATCCACTGAGCAAATATCTGGAGGTGCAGTAGATGTTCTAGTTTTAGATAACGTGTTGTCAAGACCATGTGGCGCTGGTAGTCCCAGCAACAGTTCTGATGTTAATGCTATTGTTCTTTTGAATCAACCACAGGAGAAACAAAATCCTGATGGAGTGTCATCAATTTTACCTGCTGGAGAAATCCCAAGTGAAGTGTCAGAAACTAGTCATAAAGTGGCCACTGAAAATGTATTAGATGGGGAGGAAACTGGGGGAATGCCCAGAACAGTGAATTGTGCTGATAATCTTGAGAATGTAGCTCCAAATTATTTATTGATGGATCAAATATCTGATGGTGGTTCAGTTTTAGATGTAGTTGTATCATCAGGGCCTTGTACTACTAGTCCAAACAGTGGTTGTGCATCTACAATTTCTCTTTCAAATCCACTTTCTTTACAGCAACAAACACACGATAGAGTCTTGTTGACTGGACCCGATGAACAAATTCCAGTCTTGGTGCCAGAAAATAGCCATGAAGAGGCTGAATATCAATTAACAGACAATGCAGCAGTGGATAAAAGTACCACATCAGACCAGCAGGGAGGAGTATGTAGAACCATGACTGAAAACAGTGTGTCCCAGCAGACTCCAGTATCTAGGTCAGTTGATTCCATGGAGCCTCTAGAACAATTGCAGCCATTATCATCTGTAGACTCCCCACCTGACCAAGATATTGGAAGAGAAGCACAGGACACTTTGGTATCTAGTCCTATTGATATTGTACCAACTAATCAATCCATTCACGTTTTACCAGTCATGGAGCCTCCAGAGCAGGAGGGCATATTACCTTCTGAAGGTTTCCTTTCTTCCAACCAGGCCCTATGTCCTTTGGTGACTGGAACTGAAGACCAGCCAACCAATGAAGATCTTCTCCCCAGCCACAATTCTGGGACATCAATTGAGATTCAAAATCAAGCTATTGTCCAACATGCGTCAAATTTGGAACTTGAGTCATGTTCTCGTCAAGTTGTGCATCCAGCCTTAAATTTGGACCTTGATTCACCTATGCTTTGTGGAGTCAGACCACAGTCTTCGGACATAAGAAATTTGCCAACTCAAGCAGAGATTAATAATCATCCTATACAAACTGCAACCCAATCAGCTTCCATGCTTGTTTTGTGCCAGGATCCGCTTAAAATTGAATTGGAAAGACTACGTAGAGTGACAGAGCAAAATATGAAAAACTATGAAAATATGAAATTGCAGTTGAAATGCGATTTTGAGAAGGAATTTGAGGAACTTCGAAGGAAATTTGAAAATAAGGGCAAGGAGATTGAGATTGAATTTCAGAAAACAAGGAAGAATCTGGATGCACATCTTAACATAGTTCTTGTTAATAAGATATTGGCTGAGGCTTTTAGGGCTAAATCCATGGATCTAAAAGAAGCTGGTGCATCAGGAATGGCACAAGATGCAAGTCTTGGGCAGCAATTATTTCAGTGGGCAAGTCAGCAAAATGCTACTCGGCCCTCTCTAGTTGCTGGTTCATCTTCCTGTGGCCCTCCTGCACCCATTTTGCAGGGTTCCTATGCAGCAACTAGTTCTCAGACGATAGCACCACCAGTACAGGCCACTTACAATACATCAGGAACTTTCTCAAGTGTTTCTGCAAGACTATCTCATATCAACTCCATGTCTTCCCCCTCGGGAAATCTTCAAGCTGTTGGGGAGATACGTTCTCCTGCACCGCATCTCCAGCATTTTAGACCATCAACCTCAACATCTGCCCCAGCCTCCAATCTCTGTACAGTTCTCCATGGGAGGCCAATGCAGCCTGCACCCAGTAACGTTCCTGTGACTTCTTCCTCATTTGCTCACAGGCCACCCCGGCCAACACCAGCAACTTTTCAGTCTGATCCTCATAGGGGGTATTGCCCTGTGAGTACAGGTGGGTTACCCATTCCTAATTTAACTACCATGAATTTACGTGCTGATGCTAACAGTCAACCTGGTACAAATCTGCCAAATGTTCTGCCACATATGCCAGATTTGGCTTCATTGAACCTATCCAAATTTGGCACAAGTACCAGCGTGCCGACTAACTCTGCCCCTCAAGCTACATCCCCTGATGTAGTCTGTTTATCAGATGATGACTGA 6000 0.4207 MKMSHDTGSGRVIDKGPITRSAREALSKKVVVNHSTTPHRKSERLEKRTPPKLAVSTKSEKQKKRMESPSPLRRSERTRNASLSDPSVSKSKSSGSKTPSKKHVAAKHSAIEASDGSEDEERDMEASSKIKVKRMDARAYRAIFEQANKDCLGESSGVDRSTKEGDDEGGGRIDECFKGNCLDSAKDDKGSLPPEDAKGKEMRAGSKLSGPVKELLENNGSAGSLLPSNATTHEASGAPEKVQSGSCKEEMSGSRDSILNENLISRCAEHEKGEKSISSKRKKTMVDMHSDDSDVDRSTKEGNGEGGGKTDECFKGNCLYSAKDDKGILPPEEAKGEEMSSRLKLSGLVKELLKNNVTVGSLVPSNAATYETSGTPERVQPDSCKEETSQMSGSRDFILNQNLISRCAERDKCEKSISYKRKRTMVDMHSDASDVDRSTKEGDDGSGGKADGCFKGNCLDSAKDDKGILPPEDAKGEEMSSEPKLSGPVKELSKNNVTVGSLVPSNAANHETGGTLERVQSDSCKEETSQMSRSRDFILNENLISRCAELDKGEKSISYKRKRTMVDMHSDASNTLVDDGNGNLMEDACSSRICSNLVGTNGPCSKRIRQISLPDVQRDQRKLTNNVDHSSPKSNGEKLSTRKKEGKSGGSVESKITEGNIVEPEKIRTQQRNLHLLLKPEIANLCEILCLPDKVKSMVESCLEYTMNNYQICTEPVSILQAFQLSLCWTAAALLNHKLNFEASLSLAKQHLNFDCKKEVVDEINSRLWDLKENFLSLTGNSKVTGSTKVSESSNGVYSYTEVTPVVELPERNNSKNIENIQNRTHQWDELLLMQQKEKQKLKKDIEIENADFVRRYKIEWAGIRSYSPNDVMRKEKLKVFNSEYVKRIAELERQHDIRLKDLEAMQLEARQKFPESSVPDDLLNTAASKELGTRPESLQTHDQAQNHNAPKAIVSDHVAERKSFDIVEVVTRAGTGVGLSEGPNTNSCVIVPCSSPVELENPLVKHTGASEMDIVASKDGPGSENKCNHAAENEYDSQGNVSKPANSREQCSDGAINMEDKSEGGVNFSCQSRDDCGQDATPSVPLPSNEETHEGKTSGVLSGEVALAVCKTSSSNNDHVEVPSSGQGTLSGTIVSKPVCGLSIEVKANGSYDDVKNMTPLNSESSEEHIPCISTMCMSNCENAAQIHEVDGNNGSNNAGTLNSTLSDEIISSQNPKSPQDHAHNVNIMCLPNYENSVQIHDDDDDGRGSNNVILNSPLIDERNAHGTIVLNKDVQVKMSETVNFTPSTEQISGGAVDVLVLDNVLSRPCGAGSPSNSSDVNAIVLLNQPQEKQNPDGVSSILPAGEIPSEVSETSHKVATENVLDGEETGGMPRTVNCADNLENVAPNYLLMDQISDGGSVLDVVVSSGPCTTSPNSGCASTISLSNPLSLQQQTHDRVLLTGPDEQIPVLVPENSHEEAEYQLTDNAAVDKSTTSDQQGGVCRTMTENSVSQQTPVSRSVDSMEPLEQLQPLSSVDSPPDQDIGREAQDTLVSSPIDIVPTNQSIHVLPVMEPPEQEGILPSEGFLSSNQALCPLVTGTEDQPTNEDLLPSHNSGTSIEIQNQAIVQHASNLELESCSRQVVHPALNLDLDSPMLCGVRPQSSDIRNLPTQAEINNHPIQTATQSASMLVLCQDPLKIELERLRRVTEQNMKNYENMKLQLKCDFEKEFEELRRKFENKGKEIEIEFQKTRKNLDAHLNIVLVNKILAEAFRAKSMDLKEAGASGMAQDASLGQQLFQWASQQNATRPSLVAGSSSCGPPAPILQGSYAATSSQTIAPPVQATYNTSGTFSSVSARLSHINSMSSPSGNLQAVGEIRSPAPHLQHFRPSTSTSAPASNLCTVLHGRPMQPAPSNVPVTSSSFAHRPPRPTPATFQSDPHRGYCPVSTGGLPIPNLTTMNLRADANSQPGTNLPNVLPHMPDLASLNLSKFGTSTSVPTNSAPQATSPDVVCLSDDD* 2000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1345 1999 MobiDBLite consensus disorder prediction 635 651 - -
Apr3g1345 1999 MobiDBLite consensus disorder prediction 1472 1520 - -
Apr3g1345 1999 MobiDBLite consensus disorder prediction 1063 1100 - -
Apr3g1345 1999 MobiDBLite consensus disorder prediction 1974 1990 - -
Apr3g1345 1999 MobiDBLite consensus disorder prediction 464 496 - -
Apr3g1345 1999 MobiDBLite consensus disorder prediction 612 626 - -
Apr3g1345 1999 MobiDBLite consensus disorder prediction 1895 1909 - -
Apr3g1345 1999 MobiDBLite consensus disorder prediction 221 239 - -
Apr3g1345 1999 MobiDBLite consensus disorder prediction 428 448 - -
Apr3g1345 1999 MobiDBLite consensus disorder prediction 247 261 - -
Apr3g1345 1999 MobiDBLite consensus disorder prediction 609 657 - -
Apr3g1345 1999 MobiDBLite consensus disorder prediction 932 951 - -
Apr3g1345 1999 Coils Coil 832 852 - -
Apr3g1345 1999 MobiDBLite consensus disorder prediction 367 392 - -
Apr3g1345 1999 MobiDBLite consensus disorder prediction 36 80 - -
Apr3g1345 1999 Coils Coil 875 909 - -
Apr3g1345 1999 MobiDBLite consensus disorder prediction 148 311 - -
Apr3g1345 1999 Coils Coil 1680 1707 - -
Apr3g1345 1999 MobiDBLite consensus disorder prediction 1894 1922 - -
Apr3g1345 1999 MobiDBLite consensus disorder prediction 81 100 - -
Apr3g1345 1999 MobiDBLite consensus disorder prediction 932 952 - -
Apr3g1345 1999 MobiDBLite consensus disorder prediction 265 308 - -
Apr3g1345 1999 MobiDBLite consensus disorder prediction 1 134 - -
Apr3g1345 1999 PANTHER - 3 152 - -
Apr3g1345 1999 PANTHER - 294 433 - -
Apr3g1345 1999 PANTHER - 1531 1999 - -
Apr3g1345 1999 PANTHER - 1092 1527 - -
Apr3g1345 1999 PANTHER - 154 293 - -
Apr3g1345 1999 PANTHER - 434 1068 - -
Apr3g1345 1999 PANTHER HELICASE PROTEIN MOM1 154 293 IPR039322 GO:0031507
Apr3g1345 1999 PANTHER HELICASE PROTEIN MOM1 1531 1999 IPR039322 GO:0031507
Apr3g1345 1999 PANTHER HELICASE PROTEIN MOM1 294 433 IPR039322 GO:0031507
Apr3g1345 1999 PANTHER HELICASE PROTEIN MOM1 1092 1527 IPR039322 GO:0031507
Apr3g1345 1999 PANTHER HELICASE PROTEIN MOM1 3 152 IPR039322 GO:0031507
Apr3g1345 1999 PANTHER HELICASE PROTEIN MOM1 434 1068 IPR039322 GO:0031507
Apr3g1345 1999 MobiDBLite consensus disorder prediction 1065 1097 - -
Apr3g1345 1999 MobiDBLite consensus disorder prediction 156 203 - -
Apr3g1345 1999 MobiDBLite consensus disorder prediction 464 480 - -
Apr3g1345 1999 MobiDBLite consensus disorder prediction 1974 1999 - -
Apr3g1345 1999 MobiDBLite consensus disorder prediction 1472 1527 - -
Apr3g1345 1999 Gene3D - 1675 1757 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1345 Apr-Chr3 27934403 27948410 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1345 - - aprc:113857484 3910.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1345 3 27934403 27948410 Apr3g1345 3 27934403 27948410 ECH
Apr2g2188 2 27038612 27064189 Apr3g1345 3 27934403 27948410 PCT