Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1344 ATGGGAAGTATTGTTCTTGTCCACAAAATTATGCTTCATCTTTTGTTTGTTGCTTGGATGTGCTTAAGTGCATGCACTGCTCAGTTGTCCTATGACCCTAATAACTGTACTTCAAATGAAACTATGCGAGGGTCAAGGTATAGTTGCAAGTCACCGCAGGATTCATGCCAAACATTCTTGGTGTATAGAGCTAACAAACTTTTTCAGACCATTTCAGATGTTTCAAAGCTCTTCAACAAAAGCTCTGAAGAGTTGCTTCTAATAAACAACCTCACTTCTTCTTCTGAGGTACTCAAACAAGGTAAAGAGGTTCTTCTTCCTATTAATTGTACCTGCTCTAACCAATATTATGAAGCTAGTTTAAGCTATGAAGCCAAAGAAAACACAACATTTTCCGACATTGCTTGTGAAGTTTTTGAAGGGCTTCTTAAACATCTTACACTTGCAGAGGAAAATCTTCCACGAGGTAATGAGCCAGAAGCTAGTTCTGAGCTTCAGGTGCCTCTTATATGTGCTTGTCCTAACAGTGACAGTTTCACAAGGAGCAAGAGGGTGAAGTACCTTGTCACGTACCCTCTAGTACTGGGAGATGATCCATATACACTGAGTAAAAAATTTGGCATATCACCTGAAGATTTCTCAGCAGTGAATGACTTGAATTCCTTGTCAACAATTTACCCTGAAACAGTTGTTTTGATTCCATCAATGGATGCTCCAATCAGAATACTTGATATTCCTGATTCTCCTTCCCCACCTCCTGGTTTTCTTCCTACAAATCCAGTGGTTACTACACAGGAATCCACACAGCCATCAAATTTGTACATTGCAGGATCTATTATAGGATTTTTGTTGTTCACAACACTGCTTGCAAGTGGATTGTACATGAAGAGGATGAGGAAAAGTGATGTTGTACATTCCTTGAATCCAACAAACTTCCCTACCTTGTGGTCATCAAGTAGAGGCTCTCCTATATCAACTCAAACGGGTAAAAGCTCAACAATCACATGTCTATCTCCTGATCTTCTTGTTGGAATCAAGTATTGCTTACTCAATTACAGCATAGAAGAGCTTGAAAAGGCCACAAAGAATTTCAGTGAAGAAAACAAGATTGATGACTTAGTCTACAAAGGCTCAGTGAATGATGTTGAGGTGATGATAAAGAGGATGAGGGTGGAAGACATTAGACAGGTGATTGATTTACATTCTAAAATCAACCACATTAATATTGTGAACTTACTTGGTGTTTGTTATGCTGAGAGCAATGTTTCATGGTCTTATTTAGTTTTTGAGTTGCCTAAAAATGGATGCTTGAGGGAGTGCTTATCTGATCCATGCAATCCTCTAAATTGGGACAAACGGAGACAAATAGCCTTTGATATTGCAACATGTCTTTACTATTTACATTGTTGTTCTTTTCCTTCCTATGCTCACATGAATGTGACTAGTAGAAATATATTCATAACGGAAAATTGGAGGGGGAAAGTGGCAGATGTTGGAAGGGCATTGGCTCCTAGTGTCACACCCACCAAAAGAAATGATAGCATAGAAATTCCCAAAGGGTTGGTGGCACCAGAGTACCTCTTACATGGGTCAGTTTCTGAAAAAGTTGACATTTTTGCATTTGGGGTTGTCTTGCTTGAGCTGATCTCAGGAAGAGAAATGTTTGATGGAAAATCAATCAAAGATTCACTTGGATTTTTGTCAGGGGAAGCCAGTGAAGGTGGTTGTTTTGAAGGGTTAAGGAGTTTGGTGGATCCTAATCTGAAGGATTATTCTCTTCCAGAGGCTCTGTGTTTGTCATTTTTGGCAAAGGATTGTGTGGCTGATGATCCCATCCGTAGGCCAACTATGGATGATATCATGAAAGTCCTCGCAAAAATGGTTTAG 1887 0.3943 MGSIVLVHKIMLHLLFVAWMCLSACTAQLSYDPNNCTSNETMRGSRYSCKSPQDSCQTFLVYRANKLFQTISDVSKLFNKSSEELLLINNLTSSSEVLKQGKEVLLPINCTCSNQYYEASLSYEAKENTTFSDIACEVFEGLLKHLTLAEENLPRGNEPEASSELQVPLICACPNSDSFTRSKRVKYLVTYPLVLGDDPYTLSKKFGISPEDFSAVNDLNSLSTIYPETVVLIPSMDAPIRILDIPDSPSPPPGFLPTNPVVTTQESTQPSNLYIAGSIIGFLLFTTLLASGLYMKRMRKSDVVHSLNPTNFPTLWSSSRGSPISTQTGKSSTITCLSPDLLVGIKYCLLNYSIEELEKATKNFSEENKIDDLVYKGSVNDVEVMIKRMRVEDIRQVIDLHSKINHINIVNLLGVCYAESNVSWSYLVFELPKNGCLRECLSDPCNPLNWDKRRQIAFDIATCLYYLHCCSFPSYAHMNVTSRNIFITENWRGKVADVGRALAPSVTPTKRNDSIEIPKGLVAPEYLLHGSVSEKVDIFAFGVVLLELISGREMFDGKSIKDSLGFLSGEASEGGCFEGLRSLVDPNLKDYSLPEALCLSFLAKDCVADDPIRRPTMDDIMKVLAKMV* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1344 628 ProSiteProfiles LysM domain profile. 189 233 IPR018392 -
Apr3g1344 628 Pfam Protein tyrosine and serine/threonine kinase 381 563 IPR001245 GO:0004672|GO:0006468
Apr3g1344 628 Gene3D Phosphorylase Kinase; domain 1 335 430 - -
Apr3g1344 628 Pfam LysM domain 196 234 IPR018392 -
Apr3g1344 628 CDD LysM 196 233 IPR018392 -
Apr3g1344 628 SUPERFAMILY Protein kinase-like (PK-like) 347 624 IPR011009 -
Apr3g1344 628 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 11 627 - -
Apr3g1344 628 ProSiteProfiles Protein kinase domain profile. 283 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g1344 628 Gene3D Transferase(Phosphotransferase) domain 1 433 628 - -
Apr3g1344 628 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE 11 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1344 Apr-Chr3 27925398 27927284 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1344 12 628 Receptor kinase-like Gene Family AT2G23770 29.048 1.53e-67 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Apr3g1344 PK_Tyr_Ser-Thr 8e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1344 - - gmx:100818937 974.541
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1344 3 27925398 27927284 Apr3g1344 3 27925398 27927284 ECH