Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1339 ATGCATCTTCCTAGCGATACAAGGAAGGTTGCTTTTGTTATAGTTGTTGTAATAAGCTACATTGTGGGGCCATGGCCAGTTTCATGTCAACAGAGTGGTTCGAGTGGTGGTGCTGGCGTTGAGATATTCGCACAAGAAATGTATCGTGGCATGTCCAATTATACATATGTGTTCAAGGGTGCAATTAAAAAAGAATTGGGCTATTGCATAGTTGATGTGGACGCTGATTGGGATGGGGCGTTCAATTTCACCAAAGATCTTACCTTTTTGACCATGTGTGCCCAGCAAATGAAAGGAGATATTACTCAACGCTTGTGCACAGCAGGGGAAATAGAAGCCTATGCTCGAAGTTTCGCTTCAGGGGACAAGTCAGGAACCAAATCAAACTTTTTGAAGCCCAACATAAATTGTAATATGAGTTCATGGGTTAATGGTTGTGAACCAGGATGGGGGTGTAGAGCTAATCAAAAAGTAGACCTTAATAGTAACAAGAAGGATATACCTATTAGATCTGCTGAATGCCTACCATGTTGTGAAGGTTTCTTTTGCCCTCGTGGTCTCACATGCATGATACCTTGTCCTTTGGGTTCTTACTGTCCACGTGCAGAACTCAATAAAACTAGTGGAATATGTGAACCATATCGTTATCAGCTACCTCCTGGAAAGCCTAACCATACTTGTGGAGGGGCAGATATTTGGGCAGATATTACAAGTAGCAGTGAGGTATTTTGTTCAGCAGGGTCATTTTGTCCCTCTACAATCGTAAAAAATCCTTGCAATAAGGGGTATTACTGCAGAACAGGTTCTACTGCTCAAGAGAGGTGTTTTAGGTTGGCAACCTGTGAGCCTAAATCAGCAAATCAAAATATCACTGCATATGGTGTCCTGGTTTTTGCTGGCTTGTGTTTCTTGCTTATTATCATATACAATTGTTCTGACCAAGTTCTTGCAACAAGAGAAAGAAGACAAGCAAAATCAAGAGAAAGGGCTGCTCAAAGTGTAAGAGAATCACAAGCACGTGAAAAGTGGAAATCTGCTAAAGATATTGCCAAGAAACATGCAGTAGGATTGCAATCACAGTTATCACGTACATTTTCTCGCAAAACAACTTCAAGAAAGCCAGATTTGAAAGGTTTTGGCTCTAAACATTCAGATTTACCCCCTGTTGTTGGTCCATCAAAAGGAAAGAAAAAGGATAAAAATAACCTCTCAAAAATAATAAATGATATTGAGGAAAACCCTGATAGTGAAGAAGGGTTTAATGTTCAGATAGGAGATAAAAATGTTAAAAAGCAAGCACCAAGGGGAAAGCAGTTGCATACTCAAAGCCAAATTTTCAAGTATGCATATGGTCAAATTGAGAAAGAAAAGGCTTTACAGGAACAAAACAAAAACTTGACATTTTCGGGAGTAATTTCAATGGCTAGTGATATTGAAATAAGGAAGAGGCCTACAATTGAGGTTGCTTTCAAAGATTTAACACTTACTTTAAAAGGGAAAAATAAACATCTATTAAGATGTGTGACTGGTAAACTACATCCTGGCAGAGTTTCAGCAGTCATGGGCCCTTCTGGGGCTGGTAAGACAACATTTCTTTCAGCTTTAACTGGAAAAGCAACTGGATGTCACACAACTGGACAAGTTCTTGTAAATGGCCAAGAATCTTCTATTAGATCATACAAGAAGATCATTGGATTTGTGCCACAAGATGATATTGTGCATGGCAATTTGACAGTGGAAGAGAATTTGTGGTTCAGTGCTAGATGCAGACTTTCTGCTGATCTTCCAAAAGAAGAGAAAGTGTTAGTGGTTGAAAGAGTCATTGAGGCCTTAGGTCTACAGGCAATAAGGGATTCTCTAGTTGGAACAGTGGAGAAGAGAGGAATCTCTGGAGGTCAAAGGAAAAGAGTAAATGTTGGACTTGAAATGGTGATGGAACCTTCCCTTCTAATTTTGGATGAGCCTACATCCGGTTTGGACAGCTCATCTTCTCAGTTACTTCTTAGAGCACTTAGGCGTGAAGCTCTTGAAGGAGTAAACATATGCGTGGTACTTCATCAACCGAGTTACACCTTATTCAAGATGTTTGATGATTTTATACTGCTTGCAAAAGGTGGTCTTACTGTGTATCATGGACCCATAAACAAAGTGGAAGAGTACTTTTCCAGTATGGGCATTGTTGTCCCTGATCGTGTTAACCCTCCAGATTATTACATTGACATTTTAGAAGGAATAGTAAAACTTAGTCCAAGCACAGGAGTGAACTATAAACAACTACCTGTTAGATGGATGCTTCATAATGGGTACCCAGTGCCCATGGATATGTTACAAACTGTAGAAGGAATGGCCACCACAAGTGAAGGTTCAACGCATGGAGCAGCAAATCCTGCAGAGAATGCTGAAGCACCCTCTTTTGCTGGAGAACTTTGGCAGGATGTAAAGTGCAATGTTGAGATGAAGAAGGAAACCCTTCATCATAACTTCTTAAATTCAAATGATTTGTCTAATAGGATGACACCAGGAGTGTTCACACAATACAAATACTTTCTCGGAAGAGTTGGTAAGCAGAGGCTAAGAGAAGCTAGAACACAAGCTGTAGATTTTCTGATTTTACTACTAGCTGGTCTCTGCTTAGGAACACTTGCAAAAGTGAGTGATGAAACATTTGGGGCAACCGGTTACACATACACTGTAATAGCAGTATCACTTCTTTCCAAGATTGCGGCTTTGAGATCATTCTCATTGGATAAGTTGCACTACTGGAGGGAAAGCTCTTCAGGCATGAGTAGCCTGGCTTACTTTCTTTCAAAGGATACTGTAGACCATTTCAGTACAATTATCAAACCTCTAGTTTATCTTTCCATGTTCTATTTCTTCAACAATCCAAGATCATCTGTCACAGATAACTACTTTGTTCTGCTGTGTCTAGTATATTGTGTCACTGGCATAGCTTATGTGTTAGCAATCTTCTTTCAACCAGGTCCAGCTCAGCTGTGGTCAGTGTTACTCCCAGTAGTTTTGACTCTTGTGGCAACCTATGATAATGAAGAAGATAGCAGTATTGTGCGCTTTATATCTGATTTGTGCTACACCAAGTGGGCCCTTGAAGCATTTGTAATATCAAATGCAAAAAGATATGCTGGAGTTTGGTTAATAAGTCGATGTGGTGCACTTCATTCCTATGGCTATGATCTCAAAGATTGGTACCAATGTTTAGGCCTTCTTATCGTAACAGGAATTATTAGCCGTATGCTTGCATTTTTTTGTATGATAACCTTCCAAAAGAAATAG 3291 0.3984 MHLPSDTRKVAFVIVVVISYIVGPWPVSCQQSGSSGGAGVEIFAQEMYRGMSNYTYVFKGAIKKELGYCIVDVDADWDGAFNFTKDLTFLTMCAQQMKGDITQRLCTAGEIEAYARSFASGDKSGTKSNFLKPNINCNMSSWVNGCEPGWGCRANQKVDLNSNKKDIPIRSAECLPCCEGFFCPRGLTCMIPCPLGSYCPRAELNKTSGICEPYRYQLPPGKPNHTCGGADIWADITSSSEVFCSAGSFCPSTIVKNPCNKGYYCRTGSTAQERCFRLATCEPKSANQNITAYGVLVFAGLCFLLIIIYNCSDQVLATRERRQAKSRERAAQSVRESQAREKWKSAKDIAKKHAVGLQSQLSRTFSRKTTSRKPDLKGFGSKHSDLPPVVGPSKGKKKDKNNLSKIINDIEENPDSEEGFNVQIGDKNVKKQAPRGKQLHTQSQIFKYAYGQIEKEKALQEQNKNLTFSGVISMASDIEIRKRPTIEVAFKDLTLTLKGKNKHLLRCVTGKLHPGRVSAVMGPSGAGKTTFLSALTGKATGCHTTGQVLVNGQESSIRSYKKIIGFVPQDDIVHGNLTVEENLWFSARCRLSADLPKEEKVLVVERVIEALGLQAIRDSLVGTVEKRGISGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSSSSQLLLRALRREALEGVNICVVLHQPSYTLFKMFDDFILLAKGGLTVYHGPINKVEEYFSSMGIVVPDRVNPPDYYIDILEGIVKLSPSTGVNYKQLPVRWMLHNGYPVPMDMLQTVEGMATTSEGSTHGAANPAENAEAPSFAGELWQDVKCNVEMKKETLHHNFLNSNDLSNRMTPGVFTQYKYFLGRVGKQRLREARTQAVDFLILLLAGLCLGTLAKVSDETFGATGYTYTVIAVSLLSKIAALRSFSLDKLHYWRESSSGMSSLAYFLSKDTVDHFSTIIKPLVYLSMFYFFNNPRSSVTDNYFVLLCLVYCVTGIAYVLAIFFQPGPAQLWSVLLPVVLTLVATYDNEEDSSIVRFISDLCYTKWALEAFVISNAKRYAGVWLISRCGALHSYGYDLKDWYQCLGLLIVTGIISRMLAFFCMITFQKK* 1097
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1339 1096 Pfam ABC transporter 508 657 IPR003439 GO:0005524
Apr3g1339 1096 CDD ABCG_EPDR 486 712 - -
Apr3g1339 1096 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 488 729 IPR003439 GO:0005524
Apr3g1339 1096 ProSitePatterns ABC transporters family signature. 629 643 IPR017871 GO:0005524
Apr3g1339 1096 MobiDBLite consensus disorder prediction 325 346 - -
Apr3g1339 1096 Gene3D - 477 726 IPR027417 -
Apr3g1339 1096 PANTHER ABC TRANSPORTER G FAMILY MEMBER 24 43 1093 - -
Apr3g1339 1096 SMART AAA_5 514 715 IPR003593 -
Apr3g1339 1096 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 489 727 IPR027417 -
Apr3g1339 1096 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 43 1093 - -
Apr3g1339 1096 Pfam ABC-2 type transporter 686 1096 IPR043926 GO:0140359
Apr3g1339 1096 MobiDBLite consensus disorder prediction 360 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1339 Apr-Chr3 27852224 27858337 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1339 515 718 Calmodulin-binding Proteins AT2G36910 29.464 7.36e-12 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1339 - - gmx:100809312 1934.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1339 3 27852224 27858337 Apr3g1339 3 27852224 27858337 ECH