Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1329 ATGGCCGAGCTCAAAGTAAGAAGCAGCACCAAAAAGAAGGTTGTAAGTGGCATTTGGAAGCTCAAGATTGTCTTGGAAAAGCTTCAAAAGAGTCTCTTATTGAGAAGAAATAAATCAAGTTCTTATTTTCGTGACTGTGAAGAAAGATATGATGCCACAACCTGTGTGCCAAAGGATGTGAAAGAAGGGCATTTTGCTGTGATTGCTGAGGATGAAGAGGAATCAAAGAGATTTGTGGTGCCATTGAGCTGTTTAAATAACCCAACATTCTTGAGGCTATTGGAGCAAGCTTCACAAGAGTATGGATTTGATCAAGATGGTGCATTAACCATTCCTTGCAGACCTAGTGATCTTGAGATGTTATTGTCCCAGCAATGGAAAAAAGAGGGAGAATCTGAAACTACTAGGGTAAGCTGGCACTCCAGTAACAAAGCCGTGGTTAAAAGCTACTGA 453 0.4084 MAELKVRSSTKKKVVSGIWKLKIVLEKLQKSLLLRRNKSSSYFRDCEERYDATTCVPKDVKEGHFAVIAEDEEESKRFVVPLSCLNNPTFLRLLEQASQEYGFDQDGALTIPCRPSDLEMLLSQQWKKEGESETTRVSWHSSNKAVVKSY* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1329 150 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 24 132 IPR003676 GO:0009733
Apr3g1329 150 Pfam Auxin responsive protein 41 123 IPR003676 GO:0009733
Apr3g1329 150 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR32-LIKE 24 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1329 Apr-Chr3 27733385 27733837 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1329 53 122 Calmodulin-binding Proteins AT3G43120 44.595 7.24e-13 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1329 - K14488 qsu:112024380 148.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1329 3 27733385 27733837 Apr3g1329 3 27733385 27733837 ECH
Apr2g2175 2 26867057 26867470 Apr3g1329 3 27733385 27733837 PCT