Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1326 ATGCAGAGATCAGGTTACGGTCGCGATGGAATATACAGGTCATTAAGACCTTCTTTGCTTCTCCCAAACGATCCCAACCTATCCCTCGTTTCCTTCCTCTTCGCAAGAGTTTCTTCTTTCGCCGCCAAAACAGCACTCGTCGATTCCCATTCTTCCCAAACTCTTTCATTCTCACAACTCAAAACCCAAGTCGCAAGGCTCGCCCATGGTTTCCTCCGCCTCGGAATAAACAAAAACGACGTCGTTCTCTTGCTCCTGCCCAACACCATCCACTCTCCCATATGCTTCCTCGCCGCCGCCGCAATTGGCGCTGTCGTGTCCACCGCCAACCCTATTTACACCGTTGAGGAACTCTCCAAGCAAGTCAAGGACTCCAAACCCAAGCTTGTTATCACCGTCCCCGAATTATGGGACAAAGCGAAGAATCTCAACCTCCCCGCAGTGATTATCGGCGCCGAGGAAAGCACAAGTTCGACGGTCACGAGTTTGGACGCCGTGATGGAGGGCACGGCGACGGAGCTGCCGGAAAACGGCGTGAAGCAGGGAGATACGGCGGCGCTTTTGTACTCCTCGGGGACCACGGGATTGAGCAAGGGGGTGGTCCTGACGCACCGGAATTTCATCGCGGCGGCGTTGATGATTGGCATGGACGACGATTTGGCGGGAGAGGTTAACGGCGTGTTCCTCTGCTTTTTGCCGATGTTTCACGTGTTTGGACTGGCGGTTGTGACGTACGCGCCGCTTGTGCGAGGGAGTGCGGTGGTGGTGATGAGGAAGTTCGAGTTGGAGGCCTTGGTGAAGACAATTGAGAAGCATAAGGTGACGAACATGTGGGTGGTGCCTCCCATTTTGCTTGCTCTGGCGAAACAGAGTGTTGTTGGTAAGTATGATCTTTCGTCGTTGAAGCGTATTGGTTCTGGTGCTGCTCCTCTTGGAAAAGACTTGATGGAAGATTGTGCCAAACGATTACCTCATGCTACAGTTTGTCAGGGCTATGGTATGACAGAAACTTGTGGCATAGTTAGTATGGAGAATCCAAGAGTAGGGATTCGTCATAGCGGGTCAGCAGGAACTCTGGCTTCCGGAGTCGAAGCTCAAATAGTGAGTGTGGAAACACAGAAGGCGCTACCTCCTACACAGTTGGGTGAGATATGGGTACGGGGTCCTAACATGATGCAAGGTTATCATAACAATCCACAGGCCACAAGACTGACTATAGATAAAAAGGGGTGGGTACATACAGGAGATCTTGGATATTTTGATGAAATTGGGCAACTTTTTGTTGTTGACCGTATCAAAGAACTGATCAAGTACAAAGGTTTTCAGGTTGCACCAGCAGAACTTGAGGGGCTTCTAGTTTCTCACCCTGAAATACTAGATGCTGTTGTTGTCCCATATCCGGATGATGAGGCTGGTGAGGTTCCAATTGCCTTTGTTGTTCGTTCACCCAACAGTTCACTGACTGAAGAAGAAGTTCAGAAGTTCATTGCTAATCAGGTTGCACCTTTCAAAAAATTGAGAAGGGTGACATTCATCAGCAGTGTTCCTAAGACAGCTTCAGGAAAAATCCTCCGAAGAGAGCTTAATGCAAAAGTCCGATCCAAAATATAA 1611 0.496 MQRSGYGRDGIYRSLRPSLLLPNDPNLSLVSFLFARVSSFAAKTALVDSHSSQTLSFSQLKTQVARLAHGFLRLGINKNDVVLLLLPNTIHSPICFLAAAAIGAVVSTANPIYTVEELSKQVKDSKPKLVITVPELWDKAKNLNLPAVIIGAEESTSSTVTSLDAVMEGTATELPENGVKQGDTAALLYSSGTTGLSKGVVLTHRNFIAAALMIGMDDDLAGEVNGVFLCFLPMFHVFGLAVVTYAPLVRGSAVVVMRKFELEALVKTIEKHKVTNMWVVPPILLALAKQSVVGKYDLSSLKRIGSGAAPLGKDLMEDCAKRLPHATVCQGYGMTETCGIVSMENPRVGIRHSGSAGTLASGVEAQIVSVETQKALPPTQLGEIWVRGPNMMQGYHNNPQATRLTIDKKGWVHTGDLGYFDEIGQLFVVDRIKELIKYKGFQVAPAELEGLLVSHPEILDAVVVPYPDDEAGEVPIAFVVRSPNSSLTEEEVQKFIANQVAPFKKLRRVTFISSVPKTASGKILRRELNAKVRSKI* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1326 536 Gene3D - 10 433 IPR042099 -
Apr3g1326 536 Pfam AMP-binding enzyme C-terminal domain 447 522 IPR025110 -
Apr3g1326 536 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 4 535 - -
Apr3g1326 536 Gene3D - 434 535 IPR045851 -
Apr3g1326 536 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 4 535 - -
Apr3g1326 536 Pfam AMP-binding enzyme 36 438 IPR000873 -
Apr3g1326 536 ProSitePatterns Putative AMP-binding domain signature. 187 198 IPR020845 -
Apr3g1326 536 CDD 4CL 21 528 - -
Apr3g1326 536 SUPERFAMILY Acetyl-CoA synthetase-like 20 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1326 Apr-Chr3 27709313 27713083 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1326 1 536 Monolignol Biosynthesis Gene Families AT4G05160 68.934 0.0 786
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1326 K01904 - gmx:100808944 873.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1326 3 27709313 27713083 Apr3g1326 3 27709313 27713083 ECH
Apr2g2172 2 26841782 26846203 Apr3g1326 3 27709313 27713083 PCT