Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1299 ATGGCGAAAAGTCCAAGAATTTGGGAATTAATGTTGGTGCCACCTCCATGGCTGGAACAACTATTGTCAACCCCATTCTTTACCATGTGTCAAGCCCACATCAACGCACCCAGAAACGAATGCAACATGTATTGCCTCGATTGCAGAGACCAAGCATTCTGTTATTACTGTAGACAATCATGGCATAACAATCACCAAGTAATTCAAATAAGGAGATCTTCGTATCATGATGTTGTGAGGGTAGCAGAGATTCAGAAGGTTTTGGATATCAGTGGGGTTCAGACATATGTGATTAACAGTGCCAGAGTTCTTTTTCTCAATGAGAGGCCTCAGAATCAGCCTAAGACCAATAACGCTGTTTCTAGTGGTAAAAGCAATTCCCATTTGTGTGAAATTTGCAGAAGAAATCTCTTGGACCCTTTTCGTTTCTGTTCTTTGGGATGCAAGCTTGTAGGAATAAAGAAGAATGGGAATGCGAGTTTTGTCGTAAGCGCAAAGAAAGACGAGGAAATAGGGAGAATGCATGAAGGAATGGGAAGAGGGTTGCCATCAAAGGAAGAAGACGAAGAATTGCGTGAAGGAATCCACAAACAAGTATACCAAAGCACGTCTTCTCCTCATCTTCGGCCATCTCTACAGCCATGCTCAAATTCAAGAAGAAGAAAGGGAATACCTCAAAGGGCACCTTTAGGTCCCTAA 699 0.4249 MAKSPRIWELMLVPPPWLEQLLSTPFFTMCQAHINAPRNECNMYCLDCRDQAFCYYCRQSWHNNHQVIQIRRSSYHDVVRVAEIQKVLDISGVQTYVINSARVLFLNERPQNQPKTNNAVSSGKSNSHLCEICRRNLLDPFRFCSLGCKLVGIKKNGNASFVVSAKKDEEIGRMHEGMGRGLPSKEEDEELREGIHKQVYQSTSSPHLRPSLQPCSNSRRRKGIPQRAPLGP* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1299 232 MobiDBLite consensus disorder prediction 172 232 - -
Apr3g1299 232 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 12 230 - -
Apr3g1299 232 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 12 230 - -
Apr3g1299 232 Pfam PLATZ transcription factor 71 150 IPR006734 -
Apr3g1299 232 SUPERFAMILY B-box zinc-binding domain 27 72 - -
Apr3g1299 232 MobiDBLite consensus disorder prediction 197 220 - -
Apr3g1299 232 MobiDBLite consensus disorder prediction 172 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1299 Apr-Chr3 27489723 27495944 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Apr3g1299 PLATZ 1.5e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1299 - - aprc:113859745 488.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1299 3 27489723 27495944 Apr3g1299 3 27489723 27495944 ECH