Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1265 ATGTGGGTTTGGGCCACGACAGTGCACAGTGAAGGAATAATGAACGTGATTAATTTACGACTTTGCCACTGTTCCCATTTCGTCCTCTCACCAAAACCAAACCCAAAGGCCTCGTTCTTCGTTCCTTCATCGCTAACTCTGAGAAACCGAACAACCCCTTCTTCCATTTCCTGCAAAAAACGTTTTTTTTCTCCGATTCGAGCGTCTATGGCTTCTTCCACTGCCACACACACGGAAACGAAGCCATTTTCCGTGCTCTTCGTGTGTCTGGGCAACATTTGCAGGAGCCCAGCTGCTGAAGGAGTCTTCACAGACTTAGTCAACAAAAGGGGTCTCAATTCCAACTTCAAAATCGATTCTGCTGGCACCATTAATTACCACGAGGGAAATGAAGCAGACCCAAGAATGAGGGCAGCCTCAAAGAGGCGTGGGATTCAGATAACTTCTATTTCAAGGCCAATCACGCCTTCTGATTTCGTTGACTTTGATCTCATTCTTGCTATGGACAAAAAAAACAGAGTGGACATATTGGAGGCCTTCAATAGATGGAAAGGTAGACATACCTTGCCAGATGATGCACATAAAAAGGTTAAATTGATGTGTTCGTATTGTAAGAAGCATGATGAAACTGAAGTCCCAGATCCTTATTACGGTGGACCACAGGGGTTTGAGAAGGTGTTGGATTTGCTTGAAGATGCTTGCGAATCATTGTTGGAAAACATTTTGGCAGAAAATAAACATTTACGAGGATCTTAA 756 0.4378 MWVWATTVHSEGIMNVINLRLCHCSHFVLSPKPNPKASFFVPSSLTLRNRTTPSSISCKKRFFSPIRASMASSTATHTETKPFSVLFVCLGNICRSPAAEGVFTDLVNKRGLNSNFKIDSAGTINYHEGNEADPRMRAASKRRGIQITSISRPITPSDFVDFDLILAMDKKNRVDILEAFNRWKGRHTLPDDAHKKVKLMCSYCKKHDETEVPDPYYGGPQGFEKVLDLLEDACESLLENILAENKHLRGS* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1265 251 Gene3D - 66 246 - -
Apr3g1265 251 CDD LMWPTP 84 239 - -
Apr3g1265 251 PANTHER LOW MOLECULAR WEIGHT PHOSPHOTYROSINE PROTEIN PHOSPHATASE-RELATED 18 246 - -
Apr3g1265 251 PRINTS LMW phosphotyrosine protein phosphatase signature 85 102 IPR017867 GO:0004725|GO:0006470
Apr3g1265 251 PRINTS LMW phosphotyrosine protein phosphatase signature 128 144 IPR017867 GO:0004725|GO:0006470
Apr3g1265 251 PRINTS LMW phosphotyrosine protein phosphatase signature 212 227 IPR017867 GO:0004725|GO:0006470
Apr3g1265 251 SMART LMWPc_2 83 240 IPR023485 -
Apr3g1265 251 Pfam Low molecular weight phosphotyrosine protein phosphatase 85 238 IPR023485 -
Apr3g1265 251 SUPERFAMILY Phosphotyrosine protein phosphatases I 81 241 IPR036196 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1265 33 245 Protein tyrosine phosphatase (PTP) family AT3G44620 56.031 2.90e-90 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1265 K25307 - gmx:100797254 389.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1265 3 27134533 27137764 Apr3g1265 3 27134533 27137764 ECH