LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Apr3g1265	ATGTGGGTTTGGGCCACGACAGTGCACAGTGAAGGAATAATGAACGTGATTAATTTACGACTTTGCCACTGTTCCCATTTCGTCCTCTCACCAAAACCAAACCCAAAGGCCTCGTTCTTCGTTCCTTCATCGCTAACTCTGAGAAACCGAACAACCCCTTCTTCCATTTCCTGCAAAAAACGTTTTTTTTCTCCGATTCGAGCGTCTATGGCTTCTTCCACTGCCACACACACGGAAACGAAGCCATTTTCCGTGCTCTTCGTGTGTCTGGGCAACATTTGCAGGAGCCCAGCTGCTGAAGGAGTCTTCACAGACTTAGTCAACAAAAGGGGTCTCAATTCCAACTTCAAAATCGATTCTGCTGGCACCATTAATTACCACGAGGGAAATGAAGCAGACCCAAGAATGAGGGCAGCCTCAAAGAGGCGTGGGATTCAGATAACTTCTATTTCAAGGCCAATCACGCCTTCTGATTTCGTTGACTTTGATCTCATTCTTGCTATGGACAAAAAAAACAGAGTGGACATATTGGAGGCCTTCAATAGATGGAAAGGTAGACATACCTTGCCAGATGATGCACATAAAAAGGTTAAATTGATGTGTTCGTATTGTAAGAAGCATGATGAAACTGAAGTCCCAGATCCTTATTACGGTGGACCACAGGGGTTTGAGAAGGTGTTGGATTTGCTTGAAGATGCTTGCGAATCATTGTTGGAAAACATTTTGGCAGAAAATAAACATTTACGAGGATCTTAA	756	0.4378	MWVWATTVHSEGIMNVINLRLCHCSHFVLSPKPNPKASFFVPSSLTLRNRTTPSSISCKKRFFSPIRASMASSTATHTETKPFSVLFVCLGNICRSPAAEGVFTDLVNKRGLNSNFKIDSAGTINYHEGNEADPRMRAASKRRGIQITSISRPITPSDFVDFDLILAMDKKNRVDILEAFNRWKGRHTLPDDAHKKVKLMCSYCKKHDETEVPDPYYGGPQGFEKVLDLLEDACESLLENILAENKHLRGS*	252

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Apr3g1265	251	Gene3D	-	66	246	-	-
	Apr3g1265	251	CDD	LMWPTP	84	239	-	-
	Apr3g1265	251	PANTHER	LOW MOLECULAR WEIGHT PHOSPHOTYROSINE PROTEIN PHOSPHATASE-RELATED	18	246	-	-
	Apr3g1265	251	PRINTS	LMW phosphotyrosine protein phosphatase signature	85	102	IPR017867	GO:0004725\|GO:0006470
	Apr3g1265	251	PRINTS	LMW phosphotyrosine protein phosphatase signature	128	144	IPR017867	GO:0004725\|GO:0006470
	Apr3g1265	251	PRINTS	LMW phosphotyrosine protein phosphatase signature	212	227	IPR017867	GO:0004725\|GO:0006470
	Apr3g1265	251	SMART	LMWPc_2	83	240	IPR023485	-
	Apr3g1265	251	Pfam	Low molecular weight phosphotyrosine protein phosphatase	85	238	IPR023485	-
	Apr3g1265	251	SUPERFAMILY	Phosphotyrosine protein phosphatases I	81	241	IPR036196	-

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Apr3g1265	33	245	Protein tyrosine phosphatase (PTP) family	AT3G44620	56.031	2.90e-90	266

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Apr3g1265	K25307		-	gmx:100797254	389.423

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Apr3g1265	3	27134533	27137764	Apr3g1265	3	27134533	27137764	ECH

Showing 1 to 1 of 1 entries