Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1210 ATGTCTTCCAATAAAAAAAGTCTTTTGAGAACCGTATTCACGGCAAACGGAAGCTGTGGTTGTAGCAAAACAAAGGCCTCTGAAGTACATGAACCCACCCCAAAACCCAAAATCTCCCTTCACCAGAAGATCACAAACCCAAGCAGCATGGCATCTTCCACCACTTCATTGGAACACAACAGTGCCATCTCCGTTGATGAAGAAGATTTCACCTCCACCACAATCTCCGAATCCGAGACATTTCACGACCACAACAACAACGTTGTACTCAAACGAAGCCCACTCGTGGATAGTGTGGCCATTGAGAAGGACTCTTCAAACCCATATCATGATTTTAGACACTCCATGCTCCAAATGATCTTTGAGAAGGAGATCGAATCGGAGGACGATCTTCAAGACCTTTTGCAATGCTTTCTTCACCTCAATGCCACTTGTCACCACCATGTTATTGTTAAAGCCTTCAATGAGATCTGTGAAGAGGCTTTCCCTTACAAGGTTAGTACTACCCCTTCTGCGTCTCAACCATCTCCCTCTCGCCGGAGAAATTATTAG 552 0.4493 MSSNKKSLLRTVFTANGSCGCSKTKASEVHEPTPKPKISLHQKITNPSSMASSTTSLEHNSAISVDEEDFTSTTISESETFHDHNNNVVLKRSPLVDSVAIEKDSSNPYHDFRHSMLQMIFEKEIESEDDLQDLLQCFLHLNATCHHHVIVKAFNEICEEAFPYKVSTTPSASQPSPSRRRNY* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1210 183 Pfam Transcriptional repressor, ovate 105 160 IPR006458 -
Apr3g1210 183 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 99 158 IPR006458 -
Apr3g1210 183 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 1 166 - -
Apr3g1210 183 ProSiteProfiles OVATE domain profile. 101 160 IPR006458 -
Apr3g1210 183 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Apr3g1210 183 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 1 166 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1210 Apr-Chr3 26633991 26635415 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Apr3g1210 Ovate 1.6e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1210 - - gmx:102660065 271.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1210 3 26633991 26635415 Apr3g1210 3 26633991 26635415 ECH
Apr2g2075 2 26050133 26050757 Apr3g1210 3 26633991 26635415 PCT