Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1203 ATGGAGTCAAGGATGGATCAGTATGAGATCATGGAGCAGATCGGTCGTGGAGCTTTTGGGGCTGCCATTCTTGTTAATCACAAGGCTGAGAAGAAGAAATATGTGTTGAAAAAAATCAGGCTTGCCAGGCAGACTGAAAGATGCAGAAGATCTGCTCATCAAGAGATGGCTCTCATTGCTCGAATCCAGCATCCTTACATTGTGGAATTCAAAGAAGCGTGGGTTGAGAAGGGTTGCTATGTTTGCATTGTCACTGGCTACTGTGAAGGTGGAGACATGGCTGAATTGATGAAAAAATTAAATGGTGCTTACTTTCCTGAGGAGAAACTCTGCAAATGGTTCACTCAATTACTGTTGGCAGTTGAATACCTGCATTCAAATTTTGTTTTACATCGTGACCTAAAGTGTTCCAACATCTTTCTAACCAAGGATCAGGATGTTCGCCTAGGGGATTTCGGGCTTGCTAAGACACTAAAGGCAGATGATTTGGCTTCTTCGGTGGTAGGAACTCCTAATTACATGTGTCCTGAACTGCTTGCTGATATTCCGTATGGATTCAAATCTGATATTTGGTCGCTAGGGTGCTGTATATACGAGATGGCTGCTCATCGCCCTGCTTTTAAAGCTTCTGATATGGCAGGATTGATAAGCAAGATAAATCGTTCTTCTATTGGCCCTTTGCCTCCATGTTATTCCCCTTCATTGAAAACACTAATAAAGGGCATGCTGAGAAAAAATCCTGAGCATCGGCCAACAGCATCAGAGGTGTTAAAGCACCCTTATTTGCAGCCTTATGTTGATCAATACCGTCCATCTTTCAGCCCTCCAATAGCATCTCCTGAAAAACCAATTTCTGCTGCCAATGATCCTCGGAAAAATATGGCTGAAAGTCAAAACAGTAATAGTTCGAGCAGTGACAGAGATAATTTAATGCCAAACGAGAAAAACATTGCAACAGCAGTGGCAAAGTGTGAAAACAAAACCACCGAGACAGATATAACATCTATTGATGATGATGTCTCAGACGAAGAAAGTAGGTCTAGTAATGCCAATGCCAAAACAGCTGAGCAAGAGGTGATGAAACCCTCTCATAGTGAACACTATTCTAATGTTGAATCTAAGCAGCCAAAAACAATTAGAAATATAATGATGGCATTGAAAGAGGGAAAAGTTAGAGAAACAACTTCTCCAATGCGAGGCAATCGCATAAAGGCTGGTGGTGCATCAAGTCACAAAATAAATACAGAGACATTGTCTAAATTGCCTAAACCAAATTTTCTTGCTCCTAGTTTGAAGCCTAATTTAGAGTCACCACCAACTGTTGCACCTGCAAAGGCTACCCCTGATTCAGCAAAACGAATACATGGATCTCATCATTTTAAGCATCAGGTAGATTATCATTTGAAATTATACAAGTTACCATATGTTTCTAAAGATTTCCTCATGACCATGGAATTTATTTCTGTATGCTGGCAGTTACTGACGACAGAACCCTCACCAAAAGTTAAACCAAGACATGATTTGACTCCACCACCTGGCCTTGTCAAACAAGTAGAAGGAGATGGAGTTCCTGCCAAGCCAAGACAAAGGACTCCTCCAAGCTTACTTAAACGACCTTCATTTTCCGGACGAATGAAGGTGGCTGGACTTGATGTTCCAAATGCAGCTAGTGATATTGGGAAGGTAGGCACAAATAAAATAGCCCAGGAACCTGAGATGAGCCACTGTCAGTTAACCAATGGCAATGTACCGCATATCTCTAGACAGATTAGCAGAGAACCTCAGAAGGCTTTTGATACAATTTCTAGAGGAAGAATGCAAACAGACAGCAGTAATTCTGCCTCGTCTTCAGTTTCTATTCAAGGATGTGAACTTGCTGATGATGCAACAACTTTTATTGACTTGAGAGAACAGATAAATCCTGATCATGATAATGTAACTAGCATTGTAAGTGCGGAACCATGTCCAAACAGCAGCTCACCTACAACATGTGCACATTGTAAGATGATTGAAAAAGTGCCTAAAGAAACCTGTGTGGTTACTACCCTGAATTTTCAGAATACTGTTAGTAGTAATGAGAAAGTGGTTTCCAATTTGACTCTTAATCACCCTGTTGAAGATTCTGAGGTAAGATTCGCTTCAGAAGGTGGTCTTCTCATAAACCAGACAACTATATCTACTACCTCTGGATGTGATAATACCTCTGTAGATCCCCCTGCTGAAGCCACCAAAGAAATCAAAGATCTTGAAGATATTTCCAAGGAAATGCCTTCTAACAAGTCTATAAAACATCTACCTCCAAGTTCTGGAGAAAATTCTTTGTTTGTAGAAGTCTGTCCAGTAAGCAAGCCTGATATAGTTAGCCAGCCAACAATTCTATGTAAGTCTACTGGTGATGACAAATTCACGGTGAGGGAGCGACTGTCATCCGTGGCTGAGCCTGTTGCTCCGGTTACCAATACTAAATTATCAAGCCATAAAGTTTTGCAAGAGAAAGGAACTGTTCTGCAGAATCCACCATCAGAAAGGCCTGATACTGGCCATCTTCCTCCAGCCTTTGATGATGTTATCCATGTGATACGCCACAGTAGTTACCGCGTTGGAAGTGAGCAGCCAGTAAAAGAATCTGTGCAAATGGGAGTTCAAAATGTAGATGGTAAACTCATCAATGTAGTGAGGGATGATTTAGAAATGAGAAACATTAGCTCACCTTTGACCCTTAAACCTTCAACTTGCTCTGAAGCTACAAGCTTGAAATCAAATATTTCCGATCAGTTGGAAATGAAAAACGTGAACACTCCTCCTATCCTTAAATCCTCAAGTTTCTCTGATCCTTCAAGCTTGAAATCAAGCATGTCTGATCACCCTGGTCTTAAGGAACAAGATGTGAGTAACCCTTTTTCTTTAGTCTCAGAATCTGATTCTGCCGAGATCAGTAAAAGCAACACTTCTCTGAATGAAGACAAACCAGCAGCAAAGGAAACATTGGATGTGAAATCTTTTAGGCAAAGAGCAGAGGCACTTGAAGAGCTCTTGGAATTGTCTGCAGAATTGCTACAGCAAAATAGATTGGAGGAACTTCAAGTTGTTCTAAAGCCCTTTGGGAAAGATAAGGTTTCCCCAAGGGAGACAGCTATTTGGTTGGCTAAGAGTCTTAAAGGAATGATGTCAGAGGAAAGTGGAGCACGTTCTTCATAA 3198 0.4112 MESRMDQYEIMEQIGRGAFGAAILVNHKAEKKKYVLKKIRLARQTERCRRSAHQEMALIARIQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKLNGAYFPEEKLCKWFTQLLLAVEYLHSNFVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADIPYGFKSDIWSLGCCIYEMAAHRPAFKASDMAGLISKINRSSIGPLPPCYSPSLKTLIKGMLRKNPEHRPTASEVLKHPYLQPYVDQYRPSFSPPIASPEKPISAANDPRKNMAESQNSNSSSSDRDNLMPNEKNIATAVAKCENKTTETDITSIDDDVSDEESRSSNANAKTAEQEVMKPSHSEHYSNVESKQPKTIRNIMMALKEGKVRETTSPMRGNRIKAGGASSHKINTETLSKLPKPNFLAPSLKPNLESPPTVAPAKATPDSAKRIHGSHHFKHQVDYHLKLYKLPYVSKDFLMTMEFISVCWQLLTTEPSPKVKPRHDLTPPPGLVKQVEGDGVPAKPRQRTPPSLLKRPSFSGRMKVAGLDVPNAASDIGKVGTNKIAQEPEMSHCQLTNGNVPHISRQISREPQKAFDTISRGRMQTDSSNSASSSVSIQGCELADDATTFIDLREQINPDHDNVTSIVSAEPCPNSSSPTTCAHCKMIEKVPKETCVVTTLNFQNTVSSNEKVVSNLTLNHPVEDSEVRFASEGGLLINQTTISTTSGCDNTSVDPPAEATKEIKDLEDISKEMPSNKSIKHLPPSSGENSLFVEVCPVSKPDIVSQPTILCKSTGDDKFTVRERLSSVAEPVAPVTNTKLSSHKVLQEKGTVLQNPPSERPDTGHLPPAFDDVIHVIRHSSYRVGSEQPVKESVQMGVQNVDGKLINVVRDDLEMRNISSPLTLKPSTCSEATSLKSNISDQLEMKNVNTPPILKSSSFSDPSSLKSSMSDHPGLKEQDVSNPFSLVSESDSAEISKSNTSLNEDKPAAKETLDVKSFRQRAEALEELLELSAELLQQNRLEELQVVLKPFGKDKVSPRETAIWLAKSLKGMMSEESGARSS* 1066
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1203 1065 Gene3D Phosphorylase Kinase; domain 1 1 87 - -
Apr3g1203 1065 MobiDBLite consensus disorder prediction 432 454 - -
Apr3g1203 1065 MobiDBLite consensus disorder prediction 359 373 - -
Apr3g1203 1065 MobiDBLite consensus disorder prediction 329 374 - -
Apr3g1203 1065 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Apr3g1203 1065 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 1 1048 - -
Apr3g1203 1065 MobiDBLite consensus disorder prediction 272 312 - -
Apr3g1203 1065 MobiDBLite consensus disorder prediction 925 989 - -
Apr3g1203 1065 CDD STKc_Nek 7 262 - -
Apr3g1203 1065 ProSitePatterns Protein kinases ATP-binding region signature. 14 37 IPR017441 GO:0005524
Apr3g1203 1065 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK5-LIKE 1 1048 - -
Apr3g1203 1065 Gene3D Transferase(Phosphotransferase) domain 1 90 338 - -
Apr3g1203 1065 Coils Coil 991 1028 - -
Apr3g1203 1065 MobiDBLite consensus disorder prediction 925 991 - -
Apr3g1203 1065 ProSiteProfiles Protein kinase domain profile. 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g1203 1065 SMART serkin_6 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g1203 1065 SUPERFAMILY Protein kinase-like (PK-like) 4 290 IPR011009 -
Apr3g1203 1065 MobiDBLite consensus disorder prediction 330 346 - -
Apr3g1203 1065 MobiDBLite consensus disorder prediction 498 540 - -
Apr3g1203 1065 MobiDBLite consensus disorder prediction 291 312 - -
Apr3g1203 1065 Pfam Protein kinase domain 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1203 Apr-Chr3 26586631 26593223 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1203 14 263 MAP Kinase Kinase Kinase AT1G53570 31.373 3.23e-35 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Apr3g1203 Pkinase 5.6e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1203 K08857 - gmx:100818747 1601.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1203 3 26586631 26593223 Apr3g1203 3 26586631 26593223 ECH