Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1199 ATGGGGTTTTTGCTGAAAGAAGCTTTGAAGACTCTGTGCTCGCGGAATCAGTGGTCTTATGCTGTGTTCTGGAAGATCGGATGCAATAATTCCAAGCTGTTAATCTGGGAAGATTGCTACTATGAACCGTTGCCATCTGCTTTTCCTCAGCGAAGCACGTCTAATTTGCCTTTCCAAGATGGGGAAGGATGCTGGTTTTCTTCCCAATCTCAGCAAGGAGGGATTCAGGAGGAGGAGAGAGTCTGTTCATTGATTAACAAAATGATGGCAAATAATTCAGTCAATATTGCTGGTGAAGGGATAATTGGACGTGCAGCATTTACAGGAAACTATCAGTGGATTCTTTTGAACAATTTCACTAGAGATGCATTTCCATCGGAGGTATATACTGAGTTGCATTACCAATTTTCAGCAGGAATGCAGACAGTAGCAGTTATTCCTGTACTTCCCCATGGGGTTGTTCAACTTGGTTCTTTCTTGCCAATAATGGAAAATCTGGGATTTGTTAATGATGTGAAGAACTTGATCCTGCAATTGGGATGTTTACCTGGTGCCCTTCTATCTGAAGATTATTCAGCAAAACTTTCCAGCGAAATACATGCTGGGCCTGTGACTGTTGATCCACCAGTCATTACTTCAAACTGTGTCTCCTCACTAACTAATGGTTCCAACCAACTAAGTAATTCATCTCACGGTTCAAGATCTGTTGCTCAACCACCTCGTTCTCTAAAGGGAGAAATAAATAATTACCAAGCTTCTGTTTTACCACCTCAAACTCATAACCCAAACCAGATATATGATAGTCTTTGCCAATCAAAGGCTCGATCGATGATCAGCACAAGTTTCTGTGGCCAACAAAAGAAGACAGTTGTGGAGGCTGAAGCTAAAGTGATACCTGCAAATCATGATTCATGTCTGCAACAGCATACTGTCCATTATGCCAGACCTGCATTCAATGAATTGGCTAGTTTTGGTAAATTAAATCTAAATAACTGCAGCCTTAAATATATGGAACAACAAATTTTATCAGCAGTTGGGGGACAAAGTCATGTTAACCCAAACTTGAATCCATTAAATGCCATCAATATGTCTCAACAGAAGACAGATGGAGGCCAAATGCTTGAACCGATTGAGAGTTCTGGTAGCACTTCACTACTTGGAGGAATCCCAATATGTAGTGGAATGGGTAATATTTTGAGGACAAATATGATTAACTGCTCAGTTTCAAACCCTCCCAAAGTATCCACTGCAGATTTTTCTTCTACACAAAAAGTTGAGTTTGGAGTTCAAAATGATAATTCAACTAATGCTGGCCTTTATTCTGTGCCTAATTTGACTAATCCATCAGTTACCAGTCACCTGCGTCTAGATGGCACCAATCAGAAGCATGCTTGTGATGCTTTGGCTTCAACAGATCAAAGAATAGGCAATGATTTGTTACAGGCACTTAAAATCCCACCTCTTCATCTTGAGGAGCATGTGCCTATGAGCGATCATATCCCTGGTTTTGTTGACGATTGCCTCAATAAGGACATTACTAGTCAACATATGATGAAAATGAATGTTAAGCATGAAGAAGCATGTACTCAACTTTCATCTGGTGATGACCTCTTCGATGTTTTAGGTATGGATTTCAAAAGGAATCTACTGAATGGAGACTGGAATAAGTTGCTTGCCAATGATTTAGAAGCTAATGCAGAACATCTGGATAAAAAGACAACACGAATGAATTTGCAAGGTATAGGTCCTGATAAGAGTTATTCAGTTAATGAAGCAATATCAGAGAGTGGCATCTTCTCTGGGACTGGCTCTGACCACCTTTTAGATGCCGTGGTTTCAAAAGCTCAATCTGCTGTAAAACAGAATTCTGATGAAATGTCTTGCAGGACAACATTGACAAGAATTAGTACCACCTCTGTTCCCTCTCCTTCTTGCAAGCAGGTTATGTCTGATCAAGTCCAGGGGAGATTGTTTGATTTTCCTAAGATGGAGATTAAAACAGGCGCTGTGGAAACAAGTTCTCTAAGGTCTGGTTGTAGCAAGGATGATGCTGGAAACTGTTCTCAAACTACTTCCATATACGGGTCGCAGCTTAGTTCGTGGGTTGAGAATGGTAGCAATGTGAAGCGTGAAAGTAGTGTTTCAACTGGATACTCTAAGCGGCCAGATGAAGTCTGCAAATCGAATAGGAAAAGACTTAAACCTGGAGAGAACCCCAGGCCTCGACCTAAAGATCGCCAAATGATTCAAGATCGAGTGAAAGAGTTACGCGAAATTGTGCCAAATGGAGCAAAATGTAGCATCGATGCACTTCTGGAAAAGACCATCAAGCATATGCTTTTCTTGCAAAGTGTGACAAAGCATGCTGACAAGCTGAAACAGACGGGGGAATCTAAGATTGTTAGTAAAGAAGGTGGATTGCTATTAAAAGATAACTTCGAGGGAGGGGCCACATGGGCATACGAGGTTGGCTCACAATCAATGGTTTGTCCTATCATTGTTGAGGATCTTAATCCTCCTCGTCAGATGCTAGTGGAGATGCTTTGCGAGGAACGTGGCTTCTTTCTAGAAATAGCCGACCTAATCAGAGGGCTAGGTTTAACCATCTTGAAGGGGGTCATGGAAGCTCGCAATGACAAGATCTGGGCACGCTTTGCTGTTGAGGCAAACAGGGACGTAACGAGGATGGAAATTTTCATGTCGCTGGTTCGACTCTTGGATCAAACAGTGAAGGGTGGTGCATCTTCATCCAATGCAATTGATAACAATATGATGGTGTATCATTCTTTCCCACAAGCTACCCAGATACCAGCAACTGTTTGGAGAAGGATGAGTTTAGTTAGTGAAGAGCATCTCAAGATTAATATGGCATTTGTACAATGTATATGTATGTTTTCTCTTGTGTCTGCCAAGACAAACTTATCATGTGTTGGCAATGTCTGTCTACTGATGCTTTAG 2958 0.4141 MGFLLKEALKTLCSRNQWSYAVFWKIGCNNSKLLIWEDCYYEPLPSAFPQRSTSNLPFQDGEGCWFSSQSQQGGIQEEERVCSLINKMMANNSVNIAGEGIIGRAAFTGNYQWILLNNFTRDAFPSEVYTELHYQFSAGMQTVAVIPVLPHGVVQLGSFLPIMENLGFVNDVKNLILQLGCLPGALLSEDYSAKLSSEIHAGPVTVDPPVITSNCVSSLTNGSNQLSNSSHGSRSVAQPPRSLKGEINNYQASVLPPQTHNPNQIYDSLCQSKARSMISTSFCGQQKKTVVEAEAKVIPANHDSCLQQHTVHYARPAFNELASFGKLNLNNCSLKYMEQQILSAVGGQSHVNPNLNPLNAINMSQQKTDGGQMLEPIESSGSTSLLGGIPICSGMGNILRTNMINCSVSNPPKVSTADFSSTQKVEFGVQNDNSTNAGLYSVPNLTNPSVTSHLRLDGTNQKHACDALASTDQRIGNDLLQALKIPPLHLEEHVPMSDHIPGFVDDCLNKDITSQHMMKMNVKHEEACTQLSSGDDLFDVLGMDFKRNLLNGDWNKLLANDLEANAEHLDKKTTRMNLQGIGPDKSYSVNEAISESGIFSGTGSDHLLDAVVSKAQSAVKQNSDEMSCRTTLTRISTTSVPSPSCKQVMSDQVQGRLFDFPKMEIKTGAVETSSLRSGCSKDDAGNCSQTTSIYGSQLSSWVENGSNVKRESSVSTGYSKRPDEVCKSNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLEKTIKHMLFLQSVTKHADKLKQTGESKIVSKEGGLLLKDNFEGGATWAYEVGSQSMVCPIIVEDLNPPRQMLVEMLCEERGFFLEIADLIRGLGLTILKGVMEARNDKIWARFAVEANRDVTRMEIFMSLVRLLDQTVKGGASSSNAIDNNMMVYHSFPQATQIPATVWRRMSLVSEEHLKINMAFVQCICMFSLVSAKTNLSCVGNVCLLML* 986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1199 985 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 1 935 - -
Apr3g1199 985 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 733 782 IPR011598 GO:0046983
Apr3g1199 985 MobiDBLite consensus disorder prediction 222 241 - -
Apr3g1199 985 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 175 IPR025610 -
Apr3g1199 985 MobiDBLite consensus disorder prediction 705 746 - -
Apr3g1199 985 CDD bHLH_AtLHW_like 737 806 - -
Apr3g1199 985 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 935 IPR043561 GO:0003700|GO:0006355
Apr3g1199 985 MobiDBLite consensus disorder prediction 705 719 - -
Apr3g1199 985 MobiDBLite consensus disorder prediction 723 746 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1199 Apr-Chr3 26527823 26534385 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1199 500 921 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 50.577 2.89e-120 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1199 - - aprc:113857443 1977.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1199 3 26527823 26534385 Apr3g1199 3 26527823 26534385 ECH
Apr2g2063 2 25975960 25983514 Apr3g1199 3 26527823 26534385 PCT