Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1192 ATGGACGTTGATTCGTCGATGGTGCCGGAGGCCGATCAAGATCCGGCGGTGCAGAACCATGCCGAGAGAGAGCAGCTAGGGGAGTCGCCGTCGTCGTCGCCGTCGAGCGGCGGAACTCCGGAACAGTCGCCGGTGCAACAGCAGGCGGCGGGGGGTGCTCAGGTGCAGCACAGTCCGGTGGTTGGTCCGAGGCTCGCGCCGACTTACTCAGTGGTGAATGCGATTTTGGAGAAGAAGGAGGATGGACCAGGGCCGCGGTGCGGCCACACGTTGACGGCGGTTGCGGCGGTTGGAGAGGAGGGAACGCCTGGATACATTGGTCCGAGGTTGATTTTGTTTGGCGGTGCCACTGCGCTCGAGGGGAATCCGGCGGCTTCAGGGACTCCTTCATCAGCTGGAAGCGCTGGCATACGTTTAGCTGGTGCCACTGCTGATGTCCACTGTTATGATGTTTTGACTAATAAATGGTCTAGGATAACTCCCATTGGAGAGCCTCCAACCCCAAGGGCTGCGCATGTGGCAACTGCTGTTGGAACAATGGTAGTTATTCAGGGTGGGATTGGTCCTGCTGGTTTGTCTGCAGAAGACCTCCATGTTCTTGATCTCACTCAGCAACGGCCGCGATGGCATAGAGTTGGTGTTCCAGGCCCTGGACCAGGGCCACGCTATGGACATGTTATGGCTTTGGTGGGGCAGAGGTATCTCATGGCAATTGGAGGCAATGATGGAAAGAGACCTTTGGCTGATGTATGGGCCTTGGACACAGCTGCCAAGCCTTATGAATGGCGCAAGTTGGAGCCAGAAGGAGAGGGTCCTCCTCCATGCATGTATGCAACTGCCAGTGCACGATCAGATGGGCTTCTTCTGCTTTGTGGAGGGAGGGACGCCAATAGTGTTCCATTGGCAAGTGCATATGGACTTGCTAAGCATAGAGATGGTCGTTGGGAATGGGCAATTGCCCCTGGTGTCTCACCATCTCCAAGATATCAGCATGCAGCGGTGTTTGTTAATGCGAGGCTCCATGTGTCTGGCGGGGCACTTGGAGGAGGACGAATGGTTGAAGATTCCTCAAGTGTTGCAGTGTTGGACACTGCTGCTGGTGTTTGGTGTGATACAAAATCTGTTGTTACCAGTCCAAGAACAGGTAGATATAGTGCTGATGCAGCTGGTGGAGATGCTTCAGTTGAATTGACACGTCGTTGTAGGCATGCTGCTGCTGCTGTTGGTGACTTGATTTTTATTTATGGTGGTTTACGTGGTGGAGTCTTGCTGGATGACTTACTTGTTGCTGAAGATCTTGCGGCTGCTGAAACAACAAATGCTGCTTCACATGCTGCTGCTGCTGCAGCAGCATCTAATGTACAAGTGATACGACTACCTGGACGATATGGGTTTGTTGATGATAGGATAAGGCAAAACATGCCTGAAGCAGCTGCTGATGGTGCAGTTGTTTTGGGAAATCCAGTTGCCCCCCCTATGAATGGTGACATATATACTGATATCAGCACTGAAAATGCTGTGCTTCAAGGGTCCAGGCGAACTAGCAAAGGAGTTGAGTATCTAGTTGAAGCATCTGCTGCAGAAGCTGAAGCTATCAGTGCAACACTGGCTGCTGCCAAGGCACGACAAGTGAATGGAGAAGTTGAATTGCCTGACCGAGATCGTGGGGCTGAGGCAACCCCTAGTGGGAAACAAATATCTTCCTTGATTAAGCCAGATTCTGTGGGGTCAAATAGTATTCCTCCTGGTGGAGTGAGGCTGCATCACAGAGCTGTGGTTGTTGCTGCAGAGACTGGTGGGGCATTAGGTGGCATGGTTAGACAGCTTTCAATTGACCAGTTTGAAAATGAAGGCAGGCGGGTCAGTTATGGGACTCCGGAAAGTGCAACAGCTGCTAGAAAATTATTAGATCGGCAGATGTCTATCAATAGTGTCCCAAAAAAGGTTATAGCTCACCTCTTAAAGCCTCGTGGTTGGAAACCACCAGTGCGTCGACAGTTTTTCTTGGAGTGCAGTGAAATAGCAGATCTTTGTGATAGTGCAGAGCGTATATTTTCAAGTGAACCAAGTGTATTACAGCTCAAGGCACCAATTAAAATATTTGGTGATTTGCATGGGCAGTTTGGGGATCTCATGCGCCTCTTTGATGAGTATGGTGCACCATCAACTGCTGGTGACATAGCATACATCGATTATCTATTCCTAGGAGATTATGTTGATAGGGGCCAACACAGCCTGGAAACTATAAGCCTTCTGCTTGCTCTTAAGGTTGAGTATCCAAACAATGTACATTTAATACGTGGAAACCATGAAGCTGCAGATATTAATGCCCTTTTTGGCTTCCGAATCGAGTGCATCGAGCGGATGGGTGAACGAGATGGAATTTGGGCATGGCACCGGATAAATCGCCTGTTTAATTGGCTTCCTCTAGCTGCACTAATTGAGAAAAAAATCATTTGCATGCATGGGGGTATTGGTCGTTCAATAAATCATGTGGAACAAATTGAGAATATTCAGCGTCCAATTACAATGGAAGCAGGATCAATTGTGCTTATGGATCTATTGTGGTCTGATCCTACAGAGAACGATAGTGTAGAAGGGCTGCGGCCAAATGCCAGGGGTCCAGGATTAGTTACTTTTGGGCCTGATCGTGTCATGGAATTTTGCAACAACAATGATCTTCAGCTGATTGTTCGTGCACATGAATGTGTGATGGATGGCTTTGAGCGTTTTGCACAGGGACATTTGATCACACTTTTCTCTGCTACAAATTACTGTGGTACTGCAAATAATGCCGGGGCGATATTAGTTTTGGGTAGAGATCTTGTTGTGGTTCCTAAACTGATTCATCCGTTGCCGCCTGCCATTTCTTCACCAGAAACCTCTCCGGAACGTCATATTGAGGATACATGGATGCAGGAGTTAAATGCTAACAGACCACCAACACCAACTAGAGGCCGTCCTCAAGTAGCAAATGACCGAGGTTCGCTTGCTTGGATATAG 3003 0.4928 MDVDSSMVPEADQDPAVQNHAEREQLGESPSSSPSSGGTPEQSPVQQQAAGGAQVQHSPVVGPRLAPTYSVVNAILEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNPAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPIGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVGVPGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDASVELTRRCRHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTNAASHAAAAAAASNVQVIRLPGRYGFVDDRIRQNMPEAAADGAVVLGNPVAPPMNGDIYTDISTENAVLQGSRRTSKGVEYLVEASAAEAEAISATLAAAKARQVNGEVELPDRDRGAEATPSGKQISSLIKPDSVGSNSIPPGGVRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVIAHLLKPRGWKPPVRRQFFLECSEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGAPSTAGDIAYIDYLFLGDYVDRGQHSLETISLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENIQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAISSPETSPERHIEDTWMQELNANRPPTPTRGRPQVANDRGSLAWI* 1001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1192 1000 Pfam Galactose oxidase, central domain 221 274 - -
Apr3g1192 1000 MobiDBLite consensus disorder prediction 1 62 - -
Apr3g1192 1000 Pfam Calcineurin-like phosphoesterase 697 904 IPR004843 GO:0016787
Apr3g1192 1000 ProSitePatterns Serine/threonine specific protein phosphatases signature. 766 771 IPR006186 GO:0016787
Apr3g1192 1000 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 1000 - -
Apr3g1192 1000 PIRSF STPPP_BSU1 32 1000 IPR012391 GO:0004721|GO:0009742
Apr3g1192 1000 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 1 1000 - -
Apr3g1192 1000 MobiDBLite consensus disorder prediction 561 575 - -
Apr3g1192 1000 SUPERFAMILY Kelch motif 140 430 IPR015915 GO:0005515
Apr3g1192 1000 SUPERFAMILY Metallo-dependent phosphatases 654 960 IPR029052 -
Apr3g1192 1000 MobiDBLite consensus disorder prediction 976 1000 - -
Apr3g1192 1000 MobiDBLite consensus disorder prediction 547 577 - -
Apr3g1192 1000 Gene3D - 633 972 IPR029052 -
Apr3g1192 1000 Gene3D - 67 192 IPR015915 GO:0005515
Apr3g1192 1000 PRINTS Serine/threonine phosphatase family signature 697 724 IPR006186 GO:0016787
Apr3g1192 1000 PRINTS Serine/threonine phosphatase family signature 732 759 IPR006186 GO:0016787
Apr3g1192 1000 PRINTS Serine/threonine phosphatase family signature 765 789 IPR006186 GO:0016787
Apr3g1192 1000 PRINTS Serine/threonine phosphatase family signature 803 829 IPR006186 GO:0016787
Apr3g1192 1000 PRINTS Serine/threonine phosphatase family signature 833 860 IPR006186 GO:0016787
Apr3g1192 1000 PRINTS Serine/threonine phosphatase family signature 893 913 IPR006186 GO:0016787
Apr3g1192 1000 PRINTS Serine/threonine phosphatase family signature 915 931 IPR006186 GO:0016787
Apr3g1192 1000 Pfam Kelch motif 327 373 IPR011498 GO:0005515
Apr3g1192 1000 Gene3D - 193 455 IPR015915 GO:0005515
Apr3g1192 1000 MobiDBLite consensus disorder prediction 24 54 - -
Apr3g1192 1000 SMART pp2a_7 669 953 IPR006186 GO:0016787
Apr3g1192 1000 CDD MPP_Bsu1_C 649 951 IPR041758 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1192 Apr-Chr3 26408436 26422621 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1192 661 896 Calmodulin-binding Proteins AT5G63870 28.676 2.81e-25 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1192 - - gmx:100788485 1776.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1192 3 26408436 26422621 Apr3g1192 3 26408436 26422621 ECH
Apr2g2056 2 25877591 25889826 Apr3g1192 3 26408436 26422621 ECH
Apr2g2056 2 25877591 25889826 Apr3g1192 3 26408436 26422621 PCT