Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1142 ATGTCTGAATTCGACACAAACATCCCAACTACTTTTGATCCCTTTGCTGAGGCAAATGCTGAGGACTCAGGAGCTGGGGCAAAAGAGTATGTTCATGTTCGTGTTCAACAGCGGAATGGAAGGAAAAGCCTAACAACTGTTCAAGGATTAAAGAAAGAGTACAGCTATAGCAAGATACTCAAAGACCTGAAGAAAGAATTCTGCTGTAATGGTACTGTTGTCCAGGACCCTGAGTTGGGCCAGGTCATACAACTTCAGGGAGATCAAAGAAAGAATGTTTCTACTTTCCTTGTGCAGGCTGGCATAGTAAAGAAGGAGCATATCAAGATTCATGGTTTCTAA 342 0.424 MSEFDTNIPTTFDPFAEANAEDSGAGAKEYVHVRVQQRNGRKSLTTVQGLKKEYSYSKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEHIKIHGF* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1142 113 SUPERFAMILY eIF1-like 7 113 IPR036877 GO:0003743|GO:0006413
Apr3g1142 113 PIRSF Transl_init_SUI1_Euk 1 113 IPR005874 GO:0003743
Apr3g1142 113 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 1 113 - -
Apr3g1142 113 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 1 113 - -
Apr3g1142 113 CDD eIF1_SUI1 29 112 IPR005874 GO:0003743
Apr3g1142 113 Pfam Translation initiation factor SUI1 28 102 IPR001950 GO:0003743|GO:0006413
Apr3g1142 113 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 7 113 IPR005874 GO:0003743
Apr3g1142 113 Gene3D - 2 113 - -
Apr3g1142 113 ProSiteProfiles Translation initiation factor SUI1 family profile. 31 101 IPR001950 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1142 Apr-Chr3 25984984 25988282 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1142 1 113 Eukaryotic Initiation Factors Gene Family AT4G27130 88.496 1.17e-74 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1142 K03113 - gmx:100784390 225.713