Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1141 ATGGGAATGGGAAGCCAAGGTTACTTCAAGGTTTTGATTATCTGTCTTGTAACGTTAATTGGATCAACTCATGCTCAATTAGAACTGGATTTCTATACTAAAAGTTGTCCAAAAGCCGAACAAATCATTTTGAAGTATGTTGAAGAGCATATCCCCCATGTTCCATCATTAGCAGCTGCTCTCATAAGACTTCACTTCCATGACTGTTTTGTTGAAGGTTGTGATGGATCAGTGCTTCTGAACTCAACAAAAAACAATCAAGCTGAAAAGGACTCTATTCCAAATCTTACACTTAGAGGCTTTGGCTTCATAGACAAAATAAAGAGTCTTGTTGAAGCTGAATGCCCTGGGGTGGTCTCTTGTGCTGATATATTAGCTTTGACTGCCAGAGACTCTGTCCATTCCATAGGGGGACCTTATTGGAATGTTCCAACAGGTCGAAGGGATGGGGTTATCTCTAAAGCAGCAGATGTGTTGCGTAGCCTTCCTGCTCCATTTCACAACCTCACCACCCTCCTAACACTCTTTGGCGATGCTGGACTTGATGCAAATGACCTTGTCGTGCTTTCCGGTGCTCACACGATTGGTGTTGCCCATTGCTCAACAATTGCGACTCGTCTATATAATTTTACTGGCAAGGGTGACACAGACCCAACTCTAGATAGTGAATATGCAACAAATCTCAAGACCTTTAAGTGTAAGAATATCAATGATAACACCACACTTCTTGAGATGGACCCTGGAAGTCGCAATACATTTGATCTTGGGTATTATAATCAAGTTGTTAAAAGAAGGGGTTTGTTCCAATCAGATGCTGCATTGCTTACTAGTTCTACCACAAGGTCTATTATTGCCAAACAACGTATGTCAACTCAAAGATTCTTTTTTGAATTCGCCAAGTCCATGGAAAAAATGGGTCGAAATAAAGTCAAGACTGGGACTGAAGCAGAGATTAGGAAACATTGTGCACTAGTAAATAGCTAA 984 0.4096 MGMGSQGYFKVLIICLVTLIGSTHAQLELDFYTKSCPKAEQIILKYVEEHIPHVPSLAAALIRLHFHDCFVEGCDGSVLLNSTKNNQAEKDSIPNLTLRGFGFIDKIKSLVEAECPGVVSCADILALTARDSVHSIGGPYWNVPTGRRDGVISKAADVLRSLPAPFHNLTTLLTLFGDAGLDANDLVVLSGAHTIGVAHCSTIATRLYNFTGKGDTDPTLDSEYATNLKTFKCKNINDNTTLLEMDPGSRNTFDLGYYNQVVKRRGLFQSDAALLTSSTTRSIIAKQRMSTQRFFFEFAKSMEKMGRNKVKTGTEAEIRKHCALVNS* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1141 327 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr3g1141 327 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr3g1141 327 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr3g1141 327 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr3g1141 327 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr3g1141 327 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Apr3g1141 327 PANTHER PEROXIDASE 6 326 - -
Apr3g1141 327 Gene3D Peroxidase, domain 2 163 305 - -
Apr3g1141 327 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr3g1141 327 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr3g1141 327 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr3g1141 327 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr3g1141 327 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr3g1141 327 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr3g1141 327 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr3g1141 327 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr3g1141 327 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr3g1141 327 ProSiteProfiles Plant heme peroxidase family profile. 26 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr3g1141 327 CDD secretory_peroxidase 26 325 IPR033905 GO:0004601|GO:0042744
Apr3g1141 327 SUPERFAMILY Heme-dependent peroxidases 26 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
Apr3g1141 327 Pfam Peroxidase 49 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr3g1141 327 Gene3D - 30 326 - -
Apr3g1141 327 PANTHER PEROXIDASE 25-RELATED 6 326 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr3g1141 327 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1141 Apr-Chr3 25971639 25973134 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1141 16 327 Peroxidase AT1G05260 62.620 4.77e-148 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1141 K00430 - gmx:100785662 551.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1141 3 25971639 25973134 Apr3g1141 3 25971639 25973134 ECH
Apr2g2003 2 25374844 25376236 Apr3g1141 3 25971639 25973134 PCT