Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1139 ATGGTTGAACGAAAGCAGTTCAAGACCAAGTTATGTGTGCTGTATCAGAGAGGTCGCTGCACGCGCCATAATTGCTCCTTTGCGCATGGGAGTGCCGAGCTCCGACGATTCCCTGCTTCATACAGTGGGAGGAGAGACTATTTAGGTGATGACTTGAGGGACAAACTTGACAGGAGGCATTTATCACGTCGAAGGTACTCACCAGCTCGAGATGCAAGAGGACACCAGACCATTCGTGACTACAGTCCTTCAAGGTCTTTGGAGAAAAAAAGTGACAGAAGACGTAGGAGAAAACAGGGCATTACTGGCCAAAGTGATATTTCTGAAAATTTGAGAGTCTCAGATAGAATTCGAGATCGAGTTCAAGAAGGAAAATTGCTTTCCTCTGGTTCTAGAAATACACTTGAGGAGCAGCTGAAAAAAGTGTATTCAGATATCAACACTCTTGAGAATCGAAAATTCCAGCTAGCGGTCTACCTTGATGAGAGTGTTCAAGAGGCGGATAGTCTTAATTCTAGAATTCAGGAACTTGAGGCTCAATTATGCAGAGAGGATGAGGAGTGTAAAAGAATCACTTCAAGGATAAGGAAATTTGTTAGAGTGCACAATCATATCTCACTGTTACAAGATGACTTGAAGAGGTCACAAGTCCGACTTCAAAGGTTCGGAGATCAGCTTGTCTCAGACATTTCTAGAGTTGGTGCCAATGAAGAAGATTTAAGCATTGATATTGTAAGCAATGGTGAAAATACTGGTCTTCCTCCAATTGTCAAACATAATGTGGAACACAATGATACATCTTCCCACAGAAAAAGGCTGCATGTAGAACGAGATGCTTTGGAAGAGTTACAACAAGATAAATCAAAAGATGGGCATTTGGTTGAGACAGCAAGAACTAGGAAGCGTTCTCGCTGGAATATATCTGATCAATTGAATAGCAAGGGTAATGAGGGCCCACACAGTGGAACTGAAGTTGCTAGACCACTAGATCTTGTAGGCAAGCACAAGAGAGGATTGAAGGAATCTAGGATTGAAGTTCCATCAACCAGCATGGCAGCTCATGTGGTTGATGAGGAAGTTGAGATTGAACTTGACGACAGAACTAATATCAATGAAACTGCAAATACGGAAAATGAGAATGGAGTGGCAAATAAGGTGAAGGTAGCTCCACTTATGCTTCCCCTGGCTTTGATTCCTCGCAGCAATTATTCGCAGTACGAGGGTAACGACGAGAATGTTGATGTGGATGGTCTTGACGAAGATGCAGCAGGGGCACATGTGGACATAATGTAG 1293 0.4308 MVERKQFKTKLCVLYQRGRCTRHNCSFAHGSAELRRFPASYSGRRDYLGDDLRDKLDRRHLSRRRYSPARDARGHQTIRDYSPSRSLEKKSDRRRRRKQGITGQSDISENLRVSDRIRDRVQEGKLLSSGSRNTLEEQLKKVYSDINTLENRKFQLAVYLDESVQEADSLNSRIQELEAQLCREDEECKRITSRIRKFVRVHNHISLLQDDLKRSQVRLQRFGDQLVSDISRVGANEEDLSIDIVSNGENTGLPPIVKHNVEHNDTSSHRKRLHVERDALEELQQDKSKDGHLVETARTRKRSRWNISDQLNSKGNEGPHSGTEVARPLDLVGKHKRGLKESRIEVPSTSMAAHVVDEEVEIELDDRTNINETANTENENGVANKVKVAPLMLPLALIPRSNYSQYEGNDENVDVDGLDEDAAGAHVDIM* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1139 430 Coils Coil 160 180 - -
Apr3g1139 430 Coils Coil 132 152 - -
Apr3g1139 430 MobiDBLite consensus disorder prediction 59 107 - -
Apr3g1139 430 ProSiteProfiles Zinc finger C3H1-type profile. 6 32 IPR000571 GO:0046872
Apr3g1139 430 MobiDBLite consensus disorder prediction 67 89 - -
Apr3g1139 430 MobiDBLite consensus disorder prediction 304 325 - -
Apr3g1139 430 Gene3D - 1 36 - -
Apr3g1139 430 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 40 1 423 IPR045868 GO:0046872
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Apr3g1139 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1139 - - aprc:113858008 796.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1139 3 25951178 25959863 Apr3g1139 3 25951178 25959863 ECH