Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1127 ATGGAATTGACAAGACCCAGTTATGCGGTTGCTTATGTCATTCTCCTTTGTGCGTTGGCCCAAGGGGGCTCAGAGGGGAAGAGGGGGAAGGAAGAGGAGATTTTTAGAGATGGTGGGGCTTTGTCATCATCCATTTATGTACATGGAATTCAGGTAGAAAATGCGTGGAAACATTGCAGGAAAGAATTGATAGAGAGAAACAATGATGTCAAAGATTTTGACTTCCATTCACTGGAAGGGAGCAGTGACATGAGGTCTATTCTTTCAATACAAAATAGCATATACCAAGCAACTAAGTCTCTCCCTCCCGTCATGAAAAATAAATTTTTGGACTGCATAAAAACAGGAACAACTCCTTCTGCTCCTGTTTCTAAAGAAAAGGGTAGCTCTAGATATTTGTTAACAAAGCATTCTAGATCAACCTTAGGTGTGCAAAGTGGTCATGGAAGAAATTTGATTGCTGATTCACCAAGCCCTTCTGCTACTCCAAGTCATAATCCAACATCACCAACTCCTAGTCCACAAGCTAGGGATATACCACTCCCTCCAGATATGTTTGTACCATTTCCACCACCATCACGTGTACCACGTCCTCGTCCTCATCCTCCTCAAAATTTTCGACCTATAATATATGCTCCTATTTCTTCACCACCTAGCAATGATGCCAAAAAGCAACATAAAGTTCTCATAGGTTGCATTATATCAGCAGTTATAATATTGATAGGCTTGGCTCTCTGCTATCGTGAGGTCAGAAAAACCAAAGTTGACAAAGATGACAGGCCTTTGCTTGTATTAACCTCAAGTGATTATTCTGGTGGTTCACAGAAGATTGTTCGTTTGGGAGATGATGACAAGGAAGAATCTTGCATTGACAATGAAAAGAAACTTTCTAATGTTACAAACTTATCCACTAAGGATGGAGATAACAATGCTTCACAGGTTGAGACAAAACCATCAGAAGGTACAGGACAAGTACCAGCCCCTCCTAGTGGAAAACCAGCCCCTTCACCTCCTAGCGGAAAATCAGCCCCTCCACCTCCTGGACCGCCGCCGCCGCCTGCTGCTCCACGACCACCACCACCTCCAAGAGCTGCTCCTCCACCTGCTCCTCCCAAACCAATGGGAGGTAGAAATCAAGGACCACTTCGAGCTAAAGAAGGAAGTTCTAGTCAGAGTGATGCTACAAAACCAAAACTAAAGCCATTTTTCTGGGATAAGGTTTCTGCAACACCTGATCAATCAATGGTGTGGCATGAAATCAATGCAGGGTCATTTGTAATCAATGAGGAAATGATGGAGTCTTTGTTTGGATGCACCAATCAGAACAGAAATCAACGCAAGAAGGATTCATCTTTAGATAATACAGTGCAGTACATTAAGATTATTGACCCTAAGAAAGCACAGAACTTATCAATTCTTTTGCGAGCTCTGAATGTGACAACAGACGAAGTTGTTGATGCTCTGATAGAAGGTAATGAGCTTCCTGCGGAGCTCACCCAGACGTTGTTGAAGATGGCACCTACGGCAGAAGAGGAACTGAAGCTTAGGTTGTTTACTGGAGAACTGTCGGAACTAGGCCCAGCAGAGAGGTTCCTCAAAGTGTTGGTTGACATTCCATTCGCTTTCAAACGTCTTGAATGTTTGATGTTCATGTTTATCCTTCAAGACGAGTTCTCAAGCATTAAAGATTCCTTTGCAACATTAGAGGTTGCTTGCGATGAGCTCAGAAAAAGTAGGCTATTCTTAAAACTACTTGAAGCAGTTCTGAAAACTGGGAACCGCATGAACGATGGAACCTATCGTGGTGGTGCCCAAGCATTCAGGCTTGACACACTTCTAAAACTTTCAGATGTAAAAGGAACAGATGGAAAAATAACACTCTTACACTTTGTGGTTCAAGAGATCATACGCTCTGAGGGTATAAGAGCTGTTCGAACTGAGAGAGCAAGCAGAAGCATTTCAAGTGTGGGAACAGATGATTCTGATGAAGGTAGTGAAGAATCTATTGAACACTATCGAAGCCTTGGCCTTCAAGTAGTTTCAGGTTTAAGCGCTGAACTTGAAGAGGTGAAAAAAGCAGCACTTATAGATGGTGATGCACTCACTTCTGCAGTGTCAAAACTAGGTTATTCATTTGTAAAGAGTCAAGAGTTTTTGAACACTGACTTGAAAAACATTGATGAAGAAAGTGAGTTCCAACGTTGCATGGAGAAGTTTTTGGAGAAAGCAAAGGAGAATGTGACATGGCTGGTGGAGGAAGAGAAGAGAATAATGGCTTTGGTTAAGAGTACTGCAGATTACTTTCATGGGAATGCAGGGAAAGATGAAGGTTTGCGTTTGTTTTCTATTGTCCGTGATTTCTTGATAATATTGGATAAGGTATGCAAAGAGGTGAAGGACACAACTATGAAGCCAGTGAAGGCTTCTAACAGTAAGAAAGAGGCTACATCAGTGCCATCTTCTCCTGACACACGCCAACAGTCACCACCACCAGCTTCTGACTTACATAGAAGATTGTTTCCTGCAATTGCAGAACGGAGAATGGATTACTCTAGCTCTGATGATGATGATGATGATGATGACGAGTTTTCAACATAG 2598 0.4234 MELTRPSYAVAYVILLCALAQGGSEGKRGKEEEIFRDGGALSSSIYVHGIQVENAWKHCRKELIERNNDVKDFDFHSLEGSSDMRSILSIQNSIYQATKSLPPVMKNKFLDCIKTGTTPSAPVSKEKGSSRYLLTKHSRSTLGVQSGHGRNLIADSPSPSATPSHNPTSPTPSPQARDIPLPPDMFVPFPPPSRVPRPRPHPPQNFRPIIYAPISSPPSNDAKKQHKVLIGCIISAVIILIGLALCYREVRKTKVDKDDRPLLVLTSSDYSGGSQKIVRLGDDDKEESCIDNEKKLSNVTNLSTKDGDNNASQVETKPSEGTGQVPAPPSGKPAPSPPSGKSAPPPPGPPPPPAAPRPPPPPRAAPPPAPPKPMGGRNQGPLRAKEGSSSQSDATKPKLKPFFWDKVSATPDQSMVWHEINAGSFVINEEMMESLFGCTNQNRNQRKKDSSLDNTVQYIKIIDPKKAQNLSILLRALNVTTDEVVDALIEGNELPAELTQTLLKMAPTAEEELKLRLFTGELSELGPAERFLKVLVDIPFAFKRLECLMFMFILQDEFSSIKDSFATLEVACDELRKSRLFLKLLEAVLKTGNRMNDGTYRGGAQAFRLDTLLKLSDVKGTDGKITLLHFVVQEIIRSEGIRAVRTERASRSISSVGTDDSDEGSEESIEHYRSLGLQVVSGLSAELEEVKKAALIDGDALTSAVSKLGYSFVKSQEFLNTDLKNIDEESEFQRCMEKFLEKAKENVTWLVEEEKRIMALVKSTADYFHGNAGKDEGLRLFSIVRDFLIILDKVCKEVKDTTMKPVKASNSKKEATSVPSSPDTRQQSPPPASDLHRRLFPAIAERRMDYSSSDDDDDDDDEFST* 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1127 865 PRINTS Proline rich extensin signature 156 168 - -
Apr3g1127 865 PRINTS Proline rich extensin signature 180 201 - -
Apr3g1127 865 PRINTS Proline rich extensin signature 202 218 - -
Apr3g1127 865 PRINTS Proline rich extensin signature 333 358 - -
Apr3g1127 865 PANTHER FORMIN-RELATED 1 858 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Apr3g1127 865 MobiDBLite consensus disorder prediction 294 320 - -
Apr3g1127 865 Pfam Formin Homology 2 Domain 391 791 IPR015425 -
Apr3g1127 865 MobiDBLite consensus disorder prediction 116 204 - -
Apr3g1127 865 MobiDBLite consensus disorder prediction 328 375 - -
Apr3g1127 865 PANTHER FORMIN-LIKE PROTEIN 1 858 - -
Apr3g1127 865 Gene3D Formin, FH2 domain 396 827 IPR042201 -
Apr3g1127 865 MobiDBLite consensus disorder prediction 163 204 - -
Apr3g1127 865 SUPERFAMILY Formin homology 2 domain (FH2 domain) 349 803 - -
Apr3g1127 865 MobiDBLite consensus disorder prediction 134 162 - -
Apr3g1127 865 MobiDBLite consensus disorder prediction 846 865 - -
Apr3g1127 865 SMART it6_source 389 806 IPR015425 -
Apr3g1127 865 MobiDBLite consensus disorder prediction 808 831 - -
Apr3g1127 865 MobiDBLite consensus disorder prediction 278 293 - -
Apr3g1127 865 ProSiteProfiles Formin homology-2 (FH2) domain profile. 389 817 IPR015425 -
Apr3g1127 865 MobiDBLite consensus disorder prediction 264 398 - -
Apr3g1127 865 MobiDBLite consensus disorder prediction 804 839 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1127 Apr-Chr3 25827114 25833320 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1127 353 849 FH2 protein (formin) Gene Family AT5G54650 59.880 0.0 571
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1127 - - gmx:100816477 756.518