Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1119 ATGTCTCTGCAGTGTTTAGCAGGCGATACTTTGAACCAAGGTGAAAAGATTAAAGGCAATGAAACTACCCTTGTTTCAGCTGGTAAAAAATTTGAACTAGGCTTCTTTTCTCCAAGTGGAAGCGCTTCTACTATTGGGGGCACAGGAAGATACTTAGGGATATGGTATCACATGCAAGAAGGTTCAGAACCTCAAACACAAATAGTGGTGTGGGTTGCAAATAGAGACTACCCAGTTGCTGTTGATTCTACCGGAGTTTTTCAAATAGCTGATGATGGGAATCTAGTCGTATCAGACACTTCTGGAAAAAGCTATTGGTCATCCGAACTCAATGATTCTTCCTCTTCATCCACAAACAAAAGAGTGAGGCTCAATGATTCTGGGAACCTTGAGTTAGTACTAGATGAACAAAAGGGAATGAAACTCTGGGAGAGCTTTGAACACCCAACTGACACATTCCTATATGGCATGAAAATGGATAAGAATTTGAAGTTGACTAGTTGGAGAAGCCCTCAAGACCCAGCACAAGGGAACTTCACTTTTAAGATGGCTCAAACAAGGGACAACCGTTATGTCATCTCAAACCATAACCAACTTTACTGGGAGAGTGATGAAGTCCAAGAAGCAAAAGGGGGTGATGACATGAACAATGAAGTTTACAACTTTTTGACAGCCCCGAATCGATCTCTCAACTATGACAACAAGAGGCTGTTCATAAATTCTACTGGTTTTGTACAATTTTTATTACTTAATAACCAAAAGGATTTCGTTTCGTGGTTTCAGCCAAACACTACATGCATGATATATAACTATTGTGGCAACTTTGCCAGCTGTAACGACAACAGTGACAGATTATGCAAATGTTTACCCGGATTCGATTATCCTAGGTTTATGTTTCCTCGAAAAGATTACGAGGGACAGCGTGATTCTACTCTTCAAGATTGGAGATGTAATAGAAAATCAGCATCATGCGGCAAAGATACCACATTCTTAAACTTCGTGATGGTGAAAATGCGAAGCCCAGATCAACAAGTGACGGCAGAAAGTGAGTCAGAATGCAAATCTATGTGCCTTAATATGTGTCCTAAGTGCCAGGCTTATTCATACACATATCTCCCACGGCGTGATTCTAATATCTTCGCATGTTGGATCTGGACACAGAATTTGACTACCCTCAAAGAAGAGTACCTTAGGGGTGATGGTCGTAACATCTCTGTCCGTGTAGCAAAATCAGACATAGCACCAACTCCAAACACTTGTGAACCTTGTGGCACCACCTTAGTCCCTTATCCACTGAGCACTGGACTCAAATGTGGAGACCCCACGTATTTCAAATTCATCTGCAACAATTCAACGGGTCAACTTAGCTTCCTCGTCGTCAATGACAGTTACAGGGTCATTAGCATAGAACCAGTGTCAAGAAAATTCTCCATTCGAACCAATTTTAGTCGTCGCTGCAATCTACTACTTCGAGGCAATGAAAATCTGTTGATTTCTTCACCTTTTAATAATATCAACGAAGATGAATGCTCTGACCGTGTAGAGATTAATTGGGAACCACCGTCCGAACCCAGCTGTGTTCACTCCCTTGATTGTCACGGTTGGAACCATTCAACTTGCAAAGGAGAAAAGTGTCTTTGTGATGCAAACTATTACTGGCATGGCAATCTTTTAAGTTGTACTCAAAAAGCTATATCCCCTCCTAATTCTACTTCAGAAGAGCCATCGAGAAAAGGAAGTCCCAAAAGCTTACTGTCTTTGATTCTTGGTACAACTCTAACAGGAGTGGTTACTCTAGCATGCATAATTGTTTTTGCTTATGCATGCAGAAGGAAAATAGCTCTTGGGCTTATGAAAGACAGGGAACACATAAGGAGAAATAGAGGGCGCTTTTATGATAGTGAAAGACATGTGAAAGATTTGATAGGCAGGGAGGCATTGGAAGAAAAAGACAATGAAGGCGTAGAGGTCCCTTATTTTGATTTTGAGAGCATACTAGAAGCTACAAATCATTTTTCAAATGCAAATAAAATAGGGAAAGGGGGCTATGGGCAAGTTTACAAGGGTAAGCTTCAATGTGGGGAAGATATTGCAGTAAAGAGACTTTCAGTTGTTTCATCACAAGGTTTACAAGAATTCAAGAATGAGGTTGTTTTAATTGCCAAACTTCAACATCGGAACCTTGTTAGACTAAGGGGCTATTGCATAAAGGAAGATGAAAAAATTTTACTTTATGAATATATGCCTAACAGGAGCTTAGACTCATTTATATTCGATTCAACAAAGAGTGTACTTTTGGATTGGCCAATGCGTTTTGACATAATTCTTGGAGTTGCTCGTGGGTTGCTTTATCTTCACCAAGACTCAAGACTGAGAGTAATTCACAGAGATTTGAAAACCAGCAACATTCTTCTAGATGTGGAGATGCAACCAAAAATTTCTGACTTTGGATTGGCTAGAATATTTGGAGGCAAAGACACTGAGGCAAGCACACAGAGGGTAGTGGGAACTTTTGGATACATGCCTCCTGAATATGCATTATATGGACTTTTCTCAACCAAATTGGATGTTTTCAGCTTTGGTGTAGTCCTGCTTGAGATTATCAGTGGAAAAAGGAACACAGGATTCTTTAAGTCTAATGAAAGTTCAAGCCTTTTGGATCATGCTTGGAGATTATGGAAAGAGAATAGGTTATTGGATTTAATGGACTTGTCCCTGCATGAAACTTGCAATGCAAACCAACTTATTAGGTGTGCACATATTGGACTCTTATGTGTACAAGATGAACCAGATAATAGGCCAACCATGTCAAATGTTGTGATAATGCTTGATAGTGAAACTGCATCTCTCTCAAATCCTAAACAACCAACCTTCTTCAAGCGTAGAGACCTATCTAGCACAACTTCTTCAAGTTTGCAGTTGAGAGTAGCATCCTAG 2937 0.4011 MSLQCLAGDTLNQGEKIKGNETTLVSAGKKFELGFFSPSGSASTIGGTGRYLGIWYHMQEGSEPQTQIVVWVANRDYPVAVDSTGVFQIADDGNLVVSDTSGKSYWSSELNDSSSSSTNKRVRLNDSGNLELVLDEQKGMKLWESFEHPTDTFLYGMKMDKNLKLTSWRSPQDPAQGNFTFKMAQTRDNRYVISNHNQLYWESDEVQEAKGGDDMNNEVYNFLTAPNRSLNYDNKRLFINSTGFVQFLLLNNQKDFVSWFQPNTTCMIYNYCGNFASCNDNSDRLCKCLPGFDYPRFMFPRKDYEGQRDSTLQDWRCNRKSASCGKDTTFLNFVMVKMRSPDQQVTAESESECKSMCLNMCPKCQAYSYTYLPRRDSNIFACWIWTQNLTTLKEEYLRGDGRNISVRVAKSDIAPTPNTCEPCGTTLVPYPLSTGLKCGDPTYFKFICNNSTGQLSFLVVNDSYRVISIEPVSRKFSIRTNFSRRCNLLLRGNENLLISSPFNNINEDECSDRVEINWEPPSEPSCVHSLDCHGWNHSTCKGEKCLCDANYYWHGNLLSCTQKAISPPNSTSEEPSRKGSPKSLLSLILGTTLTGVVTLACIIVFAYACRRKIALGLMKDREHIRRNRGRFYDSERHVKDLIGREALEEKDNEGVEVPYFDFESILEATNHFSNANKIGKGGYGQVYKGKLQCGEDIAVKRLSVVSSQGLQEFKNEVVLIAKLQHRNLVRLRGYCIKEDEKILLYEYMPNRSLDSFIFDSTKSVLLDWPMRFDIILGVARGLLYLHQDSRLRVIHRDLKTSNILLDVEMQPKISDFGLARIFGGKDTEASTQRVVGTFGYMPPEYALYGLFSTKLDVFSFGVVLLEIISGKRNTGFFKSNESSSLLDHAWRLWKENRLLDLMDLSLHETCNANQLIRCAHIGLLCVQDEPDNRPTMSNVVIMLDSETASLSNPKQPTFFKRRDLSSTTSSSLQLRVAS* 979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1119 978 SUPERFAMILY alpha-D-mannose-specific plant lectins 69 174 IPR036426 -
Apr3g1119 978 Gene3D Transferase(Phosphotransferase) domain 1 748 961 - -
Apr3g1119 978 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 6 971 - -
Apr3g1119 978 CDD STKc_IRAK 678 944 - -
Apr3g1119 978 Pfam Protein kinase domain 673 939 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g1119 978 Gene3D Phosphorylase Kinase; domain 1 637 747 - -
Apr3g1119 978 ProSitePatterns Serine/Threonine protein kinases active-site signature. 793 805 IPR008271 GO:0004672|GO:0006468
Apr3g1119 978 Pfam S-locus glycoprotein domain 230 293 IPR000858 GO:0048544
Apr3g1119 978 Gene3D - 2 148 IPR036426 -
Apr3g1119 978 ProSitePatterns Protein kinases ATP-binding region signature. 678 700 IPR017441 GO:0005524
Apr3g1119 978 SMART serkin_6 672 943 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g1119 978 ProSiteProfiles Bulb-type lectin domain profile. 8 145 IPR001480 -
Apr3g1119 978 SMART ntp_6 325 408 IPR003609 -
Apr3g1119 978 CDD PAN_AP_plant 323 409 - -
Apr3g1119 978 ProSiteProfiles PAN/Apple domain profile. 324 409 IPR003609 -
Apr3g1119 978 ProSiteProfiles EGF-like domain profile. 262 298 IPR000742 -
Apr3g1119 978 ProSiteProfiles Protein kinase domain profile. 672 958 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g1119 978 Pfam D-mannose binding lectin 69 164 IPR001480 -
Apr3g1119 978 SMART blect_4 15 149 IPR001480 -
Apr3g1119 978 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 6 971 - -
Apr3g1119 978 SUPERFAMILY Protein kinase-like (PK-like) 654 964 IPR011009 -
Apr3g1119 978 CDD B_lectin 19 149 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1119 Apr-Chr3 25762143 25766795 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1119 646 961 Receptor kinase-like Gene Family AT4G23150 55.063 1.15e-121 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr3g1119 Pkinase 2.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1119 - - mtr:MTR_0148s0080 1115.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1119 3 25762143 25766795 Apr3g1119 3 25762143 25766795 ECH