Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1107 ATGGAGTTTGACCTTGAAAACCCTTTGGAAAACTTCCATGACCTTCATTCTAAAGCTGTCTCTTATCTCTTCCTCATTGAATCTGACCACACTCCATCACAGAATCACTTTCACACTCTCAAAGCCAAAGATCTTGACATCTCTGTCAGAAGAGAAGTCATTTCTTTAATCTCACAGTTGTCTTGTACTTTGGATCCACTCTATTCTTACCTTGCCATCAACTATCTGGATCGATTCCTAGCCAACCAAGGGATATTGCAACCAAAGCCATGGGCCCTTAGACTCCTTGCAATCTCTTGCATTTCTCTAGCTACCAAGATGATAAGAACAGAGTACTCTGCCACTGATTTCCAGGCCCTTTTGAAGCAAAGTGAGGGTGGCATCATCTTTGAGCCACAAACAATACAAAGAATGGAAGCACTTGTTTTGGGAGCTCTACAATGGAGAATGCGATCGATCACCCCCTTCTCTTTCATAACGTTCTTCATTGCCTTGTTGGGTCTCAAAGAACCACCAATGGCGCTGGTTCTGAAAAACCGTGCCGCTAAAATCATATTCAAGTCACAAAGAGAGATAAAACTTTGGGAATTCAAGCCATCTATAATCGCTGCATCCGCACTTCTCTGTGCTTCTCATGAGTTGTTTCCTTTTCAATATCCCTGCATCTTCGGAGCAATATCCGATTGTTCATTTGTACATCAAGAAAGCGTGCAGCAGTGCTATAAAGTGATTCAAGACATAGCCATAGAGGAAGAGTACGAGTCTGGGCTGAATGGGGTTTCAAGGTCAGACACACCGGTTAATGTGTTGGACCATCATTTTCTGAGTTCAGAAAGTGAAAAAACCAATGGAATCACCGTTCCTGATTCTCCTCTCAGACAAGAGAAGCACCTCAAAAGAAGGAAAATCACTGGCCCATATGGTAACAATCCAACGATTCACAGTTCTTGGATTTAA 957 0.4253 MEFDLENPLENFHDLHSKAVSYLFLIESDHTPSQNHFHTLKAKDLDISVRREVISLISQLSCTLDPLYSYLAINYLDRFLANQGILQPKPWALRLLAISCISLATKMIRTEYSATDFQALLKQSEGGIIFEPQTIQRMEALVLGALQWRMRSITPFSFITFFIALLGLKEPPMALVLKNRAAKIIFKSQREIKLWEFKPSIIAASALLCASHELFPFQYPCIFGAISDCSFVHQESVQQCYKVIQDIAIEEEYESGLNGVSRSDTPVNVLDHHFLSSESEKTNGITVPDSPLRQEKHLKRRKITGPYGNNPTIHSSWI* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1107 318 Gene3D - 33 151 - -
Apr3g1107 318 Pfam Cyclin, N-terminal domain 22 150 IPR006671 -
Apr3g1107 318 Gene3D - 23 242 - -
Apr3g1107 318 SUPERFAMILY Cyclin-like 135 249 IPR036915 -
Apr3g1107 318 SMART cyclin_7 51 144 IPR013763 -
Apr3g1107 318 SMART Cyclin_C_2 153 266 IPR004367 -
Apr3g1107 318 PANTHER CYCLINS 5 306 IPR039361 -
Apr3g1107 318 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 5 306 - -
Apr3g1107 318 CDD CYCLIN 50 143 IPR013763 -
Apr3g1107 318 SUPERFAMILY Cyclin-like 12 150 IPR036915 -
Apr3g1107 318 Pfam Cyclin, C-terminal domain 153 251 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1107 Apr-Chr3 25642678 25644601 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1107 1 300 Core Cell Cycle Gene Families AT4G03270 42.675 8.32e-76 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1107 K18812 - gmx:100783875 488.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1107 3 25642678 25644601 Apr3g1107 3 25642678 25644601 ECH
Apr2g1972 2 25090658 25092537 Apr3g1107 3 25642678 25644601 PCT